WormBase Tree Display for Gene: WBGene00000457
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WBGene00000457 | SMap | S_parent | Sequence | C37E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ceh-36 | Person_evidence | WBPerson83 | |||||
Sequence_name | C37E2.4 | ||||||||
Molecular_name | C37E2.4 | ||||||||
C37E2.4.1 | |||||||||
CE08623 | |||||||||
Other_name | CELE_C37E2.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ceh-36 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ceh | ||||||||
Allele (73) | |||||||||
Strain (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (22) | |||||||||
Ortholog (23) | |||||||||
Paralog (20) | |||||||||
Structured_description | Concise_description | ceh-36 encodes a paired-like homeodomain transcription factor that is one of three orthodenticle (OTX/OTD) homeodomain proteins in C. elegans (the others being TTX-1 and CEH-37); CEH-36 is required broadly for specification of the AWC olfactory neuron and also for establishing the left-right asymmetry of the ASEL and ASER gustatory neurons; in addition, CEH-36 is sufficient to specify the AFD thermosensory neuron fate in some cell types; CEH-36 is expressed in the AWC and ASE chemosensory neurons. | Paper_evidence | WBPaper00006146 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 03 Nov 2008 00:00:00 | ||||||||
Automated_description | Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in neuron fate specification; positive regulation of transcription by RNA polymerase II; and sensory perception of chemical stimulus. Located in nucleus. Expressed in ABaraappa; ABaraappaa; amphid neurons; and head neurons. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 5. Is an ortholog of human ARGFX (arginine-fifty homeobox); DPRX (divergent-paired related homeobox); and NOBOX (NOBOX oogenesis homeobox). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0080862 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:22448) | ||||
Molecular_info | Corresponding_CDS | C37E2.4 | |||||||
Corresponding_transcript | C37E2.4.1 | ||||||||
Other_sequence | Acan_isotig20892 | ||||||||
CRC06706_1 | |||||||||
Dviv_isotig18862 | |||||||||
CR03746 | |||||||||
Dviv_isotig18863 | |||||||||
Associated_feature (13) | |||||||||
Gene_product_binds | WBsf047574 | ||||||||
WBsf047577 | |||||||||
WBsf979157 | |||||||||
Transcription_factor | WBTranscriptionFactor000158 | ||||||||
Experimental_info | RNAi_result | WBRNAi00093990 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001118 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029642 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011721 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042116 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (23) | |||||||||
Drives_construct (46) | |||||||||
Construct_product | WBCnstr00007677 | ||||||||
WBCnstr00010927 | |||||||||
WBCnstr00011003 | |||||||||
WBCnstr00018896 | |||||||||
WBCnstr00022542 | |||||||||
WBCnstr00022977 | |||||||||
WBCnstr00037522 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (115) | |||||||||
Interaction (126) | |||||||||
Anatomy_function | WBbtf0392 | ||||||||
Map_info | Map | X | Position | 16.6588 | Error | 0.001314 | |||
Positive | Positive_clone | C37E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4209 | |||||||
Pseudo_map_position | |||||||||
Reference (87) | |||||||||
Remark | [Burglin T] registered gene name | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |