WormBase Tree Display for Gene: WBGene00000426

WBGene00000426 SMap: S_parent: Sequence: Y106G6E
  Identity: Version: 1
    Name: CGC_name: ced-12 Person_evidence: WBPerson261
      Sequence_name: Y106G6E.5
      Molecular_name: Y106G6E.5a
        Y106G6E.5a.1
        CE27228
        Y106G6E.5b
        CE20409
        Y106G6E.5b.1
      Other_name: mig-16
        CELE_Y106G6E.5 Accession_evidence: NDB BX284601
      Public_name: ced-12
    DB_info: Database: AceView gene 1K800
        WormQTL gene WBGene00000426
        WormFlux gene WBGene00000426
        NDB locus_tag CELE_Y106G6E.5
        Panther gene CAEEL|WormBase=WBGene00000426|UniProtKB=Q8STE5
          family PTHR12771
        NCBI gene 172890
        RefSeq protein NM_060292.7
            NM_001306347.3
        SwissProt UniProtAcc Q8STE5
        TrEMBL UniProtAcc V5Z1T2
        UniProt_GCRP UniProtAcc Q8STE5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: Y106G6E.5a
      Y106G6E.5b
    Corresponding_transcript: Y106G6E.5a.1
      Y106G6E.5b.1
    Other_sequence: AF416781
      CR00655
      JI167206.1
      AY861685.1
      CJC12594_1
      CRC01283_1
      Dviv_isotig16268
      Hbac_isotig06106
      Dviv_isotig16269
      CBC06779_1
    Associated_feature: WBsf034263
      WBsf663825
      WBsf664847
      WBsf664848
      WBsf984948
      WBsf1010512
      WBsf220213
      WBsf220214
  Experimental_info: RNAi_result: WBRNAi00036519 Inferred_automatically: RNAi_primary
      WBRNAi00109272 Inferred_automatically: RNAi_primary
      WBRNAi00109369 Inferred_automatically: RNAi_primary
      WBRNAi00055260 Inferred_automatically: RNAi_primary
      WBRNAi00109563 Inferred_automatically: RNAi_primary
      WBRNAi00109174 Inferred_automatically: RNAi_primary
      WBRNAi00116524 Inferred_automatically: RNAi_primary
      WBRNAi00062538 Inferred_automatically: RNAi_primary
      WBRNAi00109466 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram455
      Expr6875
      Expr6876
      Expr10206
      Expr1010820
      Expr1030242
      Expr1158798
      Expr2009843
      Expr2028083
    Drives_construct: WBCnstr00002758
      WBCnstr00004407
      WBCnstr00015516
      WBCnstr00015608
      WBCnstr00037550
    Construct_product: WBCnstr00015516
      WBCnstr00037550
    Microarray_results (22)
    Expression_cluster: WBPaper00029359_1444
      WBPaper00029359_1504
      WBPaper00029359_1678
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00044616:alg-3-4_upregulated_gene
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00048762:FOG-3_associated
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00050182:lmn-1(L535P)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00054792:FOG-3_interacting
      WBPaper00055648:germline_expressed
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00058691:set-2(bn129)_downregulated
      WBPaper00058958:100mGy-irradiation-72h_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00059763:neuron_expressed
      WBPaper00059987:Wounding_upregulated
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061340:PVQ_parent
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:Y32B12B.2-F28C1.1
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_6_1
      cgc4489_group_2
      WBPaper00025032:cluster_121
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_A_Class
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035084:L2_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_B
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      [cgc5767]:cluster_21
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(66_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    Interaction (93)
    WBProcess: WBbiopr:00000013
      WBbiopr:00000014
      WBbiopr:00000015
      WBbiopr:00000023
  Map_info: Map: I Position: 4.75777 Error: 0.005728
    Positive: Positive_clone: Y106G6E Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 3531
        4147
  Reference (104)
  Remark: Old name mig-16 [Nishiwaki K]. krb 14/11/01
    Sequence connection from [Gumienny TL, Hengartner MO]
  Method: Gene