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WormBase Tree Display for Gene: WBGene00000100

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Name Class

WBGene00000100SMapS_parentSequenceCHROMOSOME_X
IdentityVersion3
NameCGC_nameajm-1Person_evidenceWBPerson240
Sequence_nameC25A11.4
Molecular_name (42)
Other_namejam-1
H08J11.cCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
H08J11.a
H08J11.b
CELE_C25A11.4Accession_evidenceNDBBX284606
Public_nameajm-1
DB_infoDatabaseAceViewgeneXJ731
WormQTLgeneWBGene00000100
WormFluxgeneWBGene00000100
NDBlocus_tagCELE_C25A11.4
PanthergeneCAEEL|WormBase=WBGene00000100|UniProtKB=A0A1C3NSL9
familyPTHR21517
NCBIgene181148
RefSeqprotein (13)
SwissProtUniProtAccA0A1C3NSL9
TrEMBLUniProtAccH2KYC5
Q95ZY7
UniProt_GCRPUniProtAccA0A1C3NSL9
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
201 Jul 2016 14:56:15WBPerson1983EventAcquires_mergeWBGene00044785
301 Jul 2016 14:56:15WBPerson1983EventAcquires_mergeWBGene00019173
Acquires_mergeWBGene00044785
WBGene00019173
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classajm
AlleleWBVar00088057
WBVar01171850
WBVar01171851
WBVar01171852
WBVar01171853
WBVar01171854
WBVar01171855
WBVar01171856
WBVar01171857
WBVar00233764
WBVar01470382
WBVar01171858
WBVar01470383
WBVar01470384
WBVar01171859
WBVar00255423
WBVar01470385
WBVar01171860
WBVar00255424
WBVar01171861
WBVar02139798
WBVar01470386
WBVar01171862
WBVar01470387
WBVar02139799
WBVar02139800
WBVar01171863
WBVar00265182
WBVar01470388
WBVar02139801
WBVar01470389
WBVar01171864
WBVar02139802
WBVar01470390
WBVar01171865
WBVar02139803
WBVar01171866
WBVar01527246
WBVar02139804
WBVar01171867
WBVar02139805
WBVar01171868
WBVar01527247
WBVar02139806
WBVar01171869
WBVar00099590
WBVar01527248
WBVar01527249
WBVar02139807
WBVar00099591
WBVar01171870
WBVar01171871
WBVar01527250
WBVar02139808
WBVar01527251
WBVar01171872
WBVar02139809
WBVar01171873
WBVar01527252
WBVar01954492
WBVar01171874
WBVar01527253
WBVar01171875
WBVar01487396
WBVar02068018
WBVar01527254
WBVar01527255
WBVar01171876
WBVar01527256
WBVar01825254
WBVar01171877
WBVar01171878
WBVar01527257
WBVar01527258
WBVar01171879
WBVar01527259
WBVar01619582
WBVar01171880
WBVar01527260
WBVar01619583
WBVar01171881
WBVar00263728
WBVar01619584
WBVar01171882
WBVar01171883
WBVar01171884
WBVar01171885
WBVar01171886
WBVar01171887
WBVar01758832
WBVar01171888
WBVar00303775
WBVar00259504
WBVar01171889
WBVar01758833
WBVar01171890
WBVar01758834
WBVar01171891
WBVar01758835
WBVar01758836
WBVar01171892
WBVar00253248
WBVar00512055
WBVar01758837
WBVar01171893
WBVar00512056
WBVar01171894
WBVar01758838
WBVar01171895
WBVar00512057
WBVar01758839
WBVar01171896
WBVar01886642
WBVar01758840
WBVar00512058
WBVar01171897
WBVar00512059
WBVar01886643
WBVar01886644
WBVar00512060
WBVar01171898
WBVar01171899
WBVar01886645
WBVar00512061
WBVar01171900
WBVar00512062
WBVar01886646
WBVar00512063
WBVar01171901
WBVar01886647
WBVar01171902
WBVar00512064
WBVar01886648
WBVar01886649
WBVar01171903
WBVar00512065
WBVar01171904
WBVar01886650
WBVar00512066
WBVar01886651
WBVar00512067
WBVar01171905
WBVar01886652
WBVar01171906
WBVar00512068
WBVar01886653
WBVar01171907
WBVar00512069
WBVar00512070
WBVar01886654
WBVar01171908
WBVar01886655
WBVar00512071
WBVar01171909
WBVar00512072
WBVar01886656
WBVar00260261
WBVar01171910
WBVar01894628
WBVar00512073
WBVar01886657
WBVar01171911
WBVar01886658
WBVar00512074
WBVar01171912
WBVar01886659
WBVar01171913
WBVar00512075
WBVar01886660
WBVar00512076
WBVar01171914
WBVar01886661
WBVar01171915
WBVar00512077
WBVar01171916
WBVar00512078
WBVar01886662
WBVar02079991
WBVar01171917
WBVar00512079
WBVar01886663
WBVar01171918
WBVar01886664
WBVar00512080
WBVar00236586
WBVar00512081
WBVar01171919
WBVar01886665
WBVar00512082
WBVar01171920
WBVar01886666
WBVar01886667
WBVar01602078
WBVar00512083
WBVar01171921
WBVar01886668
WBVar01602079
WBVar01171922
WBVar00512084
WBVar01602080
WBVar01886669
WBVar00512085
WBVar01171923
WBVar01654848
WBVar00243349
WBVar01886670
WBVar00512086
WBVar01171924
WBVar01602081
WBVar01570934
WBVar00512087
WBVar01171925
WBVar01886671
WBVar00512088
WBVar00058970
WBVar01171926
WBVar01886672
WBVar01570935
WBVar00512089
WBVar01171927
WBVar01886673
WBVar01171928
WBVar00512090
WBVar01886674
WBVar01886675
WBVar00058975
WBVar00512091
WBVar01499963
WBVar01171929
WBVar01886676
WBVar00512092
WBVar00081758
WBVar01171930
WBVar00057700
WBVar01886677
WBVar00512093
WBVar00081759
WBVar01171931
WBVar00057705
WBVar00512094
WBVar00081760
WBVar01886678
WBVar01171932
WBVar00512095
WBVar01171933
WBVar01544517
WBVar01886679
WBVar00081761
WBVar00081762
WBVar01544518
WBVar02069011
WBVar01171934
WBVar00512096
WBVar01544519
WBVar01171935
WBVar00057710
WBVar00081764
WBVar00512097
WBVar01171936
WBVar02065476
WBVar00512098
WBVar00081766
WBVar01171937
WBVar00081767
WBVar00512099
WBVar02065477
WBVar01495738
WBVar00057715
WBVar02065478
WBVar01171938
WBVar00081768
WBVar00512100
WBVar00512101
WBVar00081769
WBVar01171939
WBVar02065479
WBVar02065480
WBVar00512102
WBVar00081770
WBVar00057720
WBVar01171940
WBVar02065481
WBVar00081771
WBVar00512103
WBVar01171941
WBVar00081772
WBVar01171942
WBVar00512104
WBVar02065482
WBVar00057725
WBVar01171943
WBVar00081773
WBVar00512105
WBVar01171944
WBVar00512106
WBVar00512107
WBVar01171945
WBVar00512108
WBVar01171946
WBVar00057730
WBVar01171947
WBVar00512109
WBVar01171948
WBVar00512110
WBVar00512111
WBVar01550838
WBVar01171949
WBVar00512112
WBVar01550839
WBVar00059010
WBVar01171950
WBVar00512113
WBVar01498697
WBVar01171951
WBVar01491152
WBVar01550840
WBVar01171952
WBVar01834991
WBVar01550841
WBVar00512114
WBVar01550842
WBVar01171953
WBVar00512115
WBVar01550843
WBVar00512116
WBVar01171954
WBVar01171955
WBVar01550844
WBVar00512117
WBVar00512118
WBVar01171956
WBVar01550845
WBVar00059020
WBVar00512119
WBVar01550846
WBVar01171957
WBVar00512120
WBVar01550847
WBVar01171958
WBVar01171959
WBVar01550848
WBVar00512121
WBVar01171960
WBVar01550849
WBVar00512122
WBVar01171961
WBVar00512123
WBVar01550850
WBVar01987427
WBVar01171962
WBVar00059030
WBVar01550851
WBVar00512124
WBVar00512125
WBVar01550852
WBVar01171963
WBVar00512126
WBVar01550853
WBVar01171964
WBVar01550854
WBVar01171965
WBVar00512127
WBVar01550855
WBVar00512128
WBVar01171966
WBVar01550856
WBVar01171967
WBVar01171968
WBVar01550857
WBVar01171969
WBVar01171970
WBVar00257561
WBVar00259585
WBVar01171971
WBVar00059045
WBVar02051077
WBVar01171973
WBVar00258484
WBVar01171974
WBVar00059050
WBVar01171975
WBVar01171976
WBVar01499642
WBVar02098824
WBVar01171977
WBVar01171978
WBVar00059055
WBVar01171979
WBVar01945779
WBVar01171980
WBVar00258307
WBVar01171981
WBVar01945780
WBVar00059060
WBVar01945781
WBVar01171982
WBVar00091483
WBVar01171983
WBVar00059065
WBVar01171984
WBVar01493761
WBVar01171985
WBVar01171986
WBVar01171987
WBVar01171988
WBVar01171989
WBVar01171990
WBVar01782556
WBVar01171991
WBVar01171992
WBVar01816331
WBVar00059080
WBVar01816332
WBVar01171993
WBVar01171994
WBVar01816333
WBVar01816334
WBVar01171995
WBVar01171996
WBVar01816335
WBVar00262187
WBVar01171997
WBVar01816336
WBVar01816337
WBVar01171998
WBVar01171999
WBVar01172000
WBVar01172001
WBVar01172002
WBVar01172003
WBVar01172004
WBVar01927848
WBVar01172005
WBVar01981161
WBVar01172006
WBVar01927849
WBVar01981162
WBVar01172007
WBVar01927850
WBVar01927851
WBVar01172008
WBVar01172009
WBVar01927852
WBVar01927853
WBVar01172010
WBVar01927854
WBVar01172011
WBVar01927855
WBVar01172012
WBVar01494892
WBVar01172013
WBVar01927856
WBVar01494893
WBVar01172014
WBVar01927857
WBVar01927858
WBVar01172015
WBVar01172016
WBVar01927859
WBVar01171831
WBVar01927860
WBVar01172017
WBVar01941480
WBVar01171832
WBVar01172018
WBVar01941481
WBVar01171833
WBVar01172019
WBVar01941482
WBVar00099530
WBVar01171834
WBVar01941483
WBVar01171835
WBVar01172020
WBVar00253744
WBVar01941484
WBVar01171836
WBVar01172021
WBVar01171837
WBVar01941485
WBVar01172022
WBVar00059135
WBVar01172023
WBVar01171838
WBVar01171839
WBVar01172024
WBVar01172025
WBVar01171840
WBVar01171841
WBVar01172026
WBVar01171842
WBVar02045164
WBVar01172027
WBVar01171843
WBVar01172028
WBVar01172029
WBVar01171844
WBVar01171845
WBVar01172030
WBVar01498960
WBVar01171846
WBVar01172031
WBVar01171847
WBVar01172032
WBVar01171848
WBVar01500067
WBVar01171849
Legacy_information[Raich WB, Hardin JD] No mutants known. Encodes protein recognized by monoclonal antibody MH27, associated with apical cell-cell junctions. Predicted gene C25A11.4 + C25A11.3
Strain (22)
RNASeq_FPKM (74)
GO_annotation00002423
00002424
00002425
00002426
00002427
00002428
00002429
00002430
00002431
00002432
00002433
00002434
00002435
00002436
00002437
00002438
00002439
00002440
00002441
00002442
00002443
00090350
00090351
00106784
Ortholog (27)
Structured_descriptionConcise_descriptionajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo; AJM-1 contains a coiled-coil motif; AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo; AJM-1 is mislocalized in a dlg-1(RNAi) background; LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia; CLC-1 colocalizes with AJM-1; vab-9 mutations enhance the adhesion defects of ajm-1 mutants; ajm-1 is expressed at the apical borders of all epithelia.Paper_evidenceWBPaper00004765
WBPaper00004961
WBPaper00005194
WBPaper00005946
WBPaper00005969
Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable cytoskeletal protein binding activity. Involved in cell-cell junction organization and embryo development. Located in apicolateral plasma membrane; cell-cell junction; and plasma membrane bounded cell projection. Expressed in several structures, including arcade cell and epithelial cell. Is an ortholog of human AJM1 (apical junction component 1 homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS (13)
Corresponding_CDS_historyC25A11.4b:wp254
C25A11.4c:wp254
C25A11.4d:wp254
C25A11.4e:wp254
Corresponding_transcript (16)
Other_sequence (84)
Associated_feature (76)
Experimental_infoRNAi_result (26)
Expr_pattern (20)
Drives_construct (23)
Construct_product (11)
AntibodyWBAntibody00000055
WBAntibody00001322
Microarray_results (94)
Expression_cluster (304)
Interaction (104)
Map_infoMapXPosition0.672056Error0.047992
PositivePositive_cloneC25A11Person_evidenceWBPerson506
Author_evidenceHardin JD
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4150
Pseudo_map_position
Reference (133)
Remark.3 gene was merged with .4 gene
Sequence connection from [Koppen M, Hardin JD]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene