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WormBase Tree Display for Variation: WBVar00081760

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Name Class

WBVar00081760EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00081760
Other_namehaw106120
cewivar00275257
C25A11.4f.1:c.262-608G>A
C25A11.4d.1:c.262-608G>A
C25A11.4c.1:c.262-608G>A
C25A11.4b.1:c.262-608G>A
C25A11.4a.1:c.-1014-608G>A
HGVSgCHROMOSOME_X:g.9086971G>A
Sequence_detailsSMapS_parentSequenceH08J11
Flanking_sequencescaaatttaaaattacagaattctaaaagatatatgacctttcaaaaaaat
Mapping_targetH08J11
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (50)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01470381
StatusLive
AffectsGeneWBGene00000100
TranscriptC25A11.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25A11.4d.1:c.262-608G>A
Intron_number3/29
C25A11.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25A11.4a.1:c.-1014-608G>A
Intron_number2/30
C25A11.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25A11.4f.1:c.262-608G>A
Intron_number2/28
C25A11.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25A11.4c.1:c.262-608G>A
Intron_number3/23
C25A11.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25A11.4b.1:c.262-608G>A
Intron_number2/18
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw106120
MethodWGS_Hawaiian_Waterston