WormBase Tree Display for Variation: WBVar02139802

WBVar02139802 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h8222
    Other_name: C25A11.4f.1:c.456+664A>G
      C25A11.4d.1:c.456+664A>G
      C25A11.4b.1:c.456+664A>G
      C25A11.4a.1:c.-820+664A>G
      C25A11.4c.1:c.456+664A>G
    HGVSg: CHROMOSOME_X:g.9089373A>G
  Sequence_details: SMap: S_parent: Sequence: H08J11
    Flanking_sequences: ATTTAAAAAAAAAAAGGTAATTTCGGACCGCTGTCATTCG AAAAGTGACAACAATTAAAGATTTTAGCTATAATTGGGTT
    Mapping_target: CHROMOSOME_X
    Source_location: 200 CHROMOSOME_X 9089310 9089310
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023690
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00000100
    Transcript: C25A11.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4d.1:c.456+664A>G
        Intron_number: 5/29
      C25A11.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4a.1:c.-820+664A>G
        Intron_number: 4/30
      C25A11.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4f.1:c.456+664A>G
        Intron_number: 4/28
      C25A11.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4c.1:c.456+664A>G
        Intron_number: 5/23
      C25A11.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4b.1:c.456+664A>G
        Intron_number: 4/18
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose