WormBase Tree Display for Gene: WBGene00000024
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| WBGene00000024 | SMap | S_parent | Sequence | AC3 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | abu | ||||||
| Allele (12) | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00057944 | ||||||
| 00057945 | |||||||
| 00057946 | |||||||
| 00057947 | |||||||
| Ortholog (26) | |||||||
| Paralog (30) | |||||||
| Structured_description | Concise_description | abu-1 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-1 expression is induced by blockage of the endoplasmic reticulum unfolded protein response, and ABU-1 may help protect the organism from damage by improperly folded nascent protein; when expressed in COS1 cells, ABU-1 localizes to the endoplasmic reticulum membrane. | Paper_evidence | WBPaper00005432 | |||
| Curator_confirmed | WBPerson1843 | ||||||
| WBPerson567 | |||||||
| Date_last_updated | 25 Oct 2013 00:00:00 | ||||||
| Automated_description | Involved in endoplasmic reticulum unfolded protein response. Located in endoplasmic reticulum membrane. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | AC3.3 | |||||
| Corresponding_transcript | AC3.3.1 | ||||||
| Other_sequence | EY468455.1 | ||||||
| ACC21420_1 | |||||||
| CJC05164_1 | |||||||
| Associated_feature | WBsf652988 | ||||||
| WBsf1001106 | |||||||
| WBsf1020303 | |||||||
| WBsf234385 | |||||||
| Experimental_info | RNAi_result (27) | ||||||
| Expr_pattern | Expr2205 | ||||||
| Expr2206 | |||||||
| Expr2207 | |||||||
| Expr1015645 | |||||||
| Expr1142803 | |||||||
| Expr2009109 | |||||||
| Expr2027345 | |||||||
| Drives_construct | WBCnstr00005153 | ||||||
| WBCnstr00005158 | |||||||
| WBCnstr00037789 | |||||||
| Construct_product | WBCnstr00037789 | ||||||
| Microarray_results (22) | |||||||
| Expression_cluster (194) | |||||||
| Interaction (79) | |||||||
| WBProcess | WBbiopr:00000008 | ||||||
| WBbiopr:00000046 | |||||||
| WBbiopr:00000079 | |||||||
| Map_info | Map | V | Position | 2.5233 | Error | 0.001312 | |
| Positive | Positive_clone | AC3 | Inferred_automatically | From CDS info | |||
| From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||
| Reference (9) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
