WormBase Tree Display for Gene: WBGene00000024
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WBGene00000024 | SMap | S_parent | Sequence | AC3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | abu | ||||||
Allele (12) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00057944 | ||||||
00057945 | |||||||
00057946 | |||||||
00057947 | |||||||
Ortholog (26) | |||||||
Paralog (30) | |||||||
Structured_description | Concise_description | abu-1 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-1 expression is induced by blockage of the endoplasmic reticulum unfolded protein response, and ABU-1 may help protect the organism from damage by improperly folded nascent protein; when expressed in COS1 cells, ABU-1 localizes to the endoplasmic reticulum membrane. | Paper_evidence | WBPaper00005432 | |||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 25 Oct 2013 00:00:00 | ||||||
Automated_description | Involved in endoplasmic reticulum unfolded protein response. Located in endoplasmic reticulum membrane. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | AC3.3 | |||||
Corresponding_transcript | AC3.3.1 | ||||||
Other_sequence | EY468455.1 | ||||||
ACC21420_1 | |||||||
CJC05164_1 | |||||||
Associated_feature | WBsf652988 | ||||||
WBsf1001106 | |||||||
WBsf1020303 | |||||||
WBsf234385 | |||||||
Experimental_info | RNAi_result (27) | ||||||
Expr_pattern | Expr2205 | ||||||
Expr2206 | |||||||
Expr2207 | |||||||
Expr1015645 | |||||||
Expr1142803 | |||||||
Expr2009109 | |||||||
Expr2027345 | |||||||
Drives_construct | WBCnstr00005153 | ||||||
WBCnstr00005158 | |||||||
WBCnstr00037789 | |||||||
Construct_product | WBCnstr00037789 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (194) | |||||||
Interaction (79) | |||||||
WBProcess | WBbiopr:00000008 | ||||||
WBbiopr:00000046 | |||||||
WBbiopr:00000079 | |||||||
Map_info | Map | V | Position | 2.5233 | Error | 0.001312 | |
Positive | Positive_clone | AC3 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00005432 | ||||||
WBPaper00006425 | |||||||
WBPaper00026601 | |||||||
WBPaper00031867 | |||||||
WBPaper00032003 | |||||||
WBPaper00037416 | |||||||
WBPaper00038304 | |||||||
WBPaper00045960 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |