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WormBase Tree Display for CDS: T13F2.1b

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Name Class

T13F2.1bSMapS_parentSequenceT13F2
StructureSource_exons1318
396689
737804
851942
9911097
15871778
DB_infoDatabaseKEGGKEGG_id1.14.19.44
SwissProtUniProtAccG5EG11
UniProtIsoformAccG5EG11-2
UniProtUniProtAccG5EG11
UniProt_GCRPUniProtAccG5EG11
AlphaFoldentryG5EG11
NCBI_proteinGI_numberGI:293324808
Protein_idCHROMOSOME_IVCBL434561
DB_remarkFAT-4 protein; contains similarity to Pfam domain PF00487 (Fatty acid desaturase); contains similarity to Interpro domains IPR012171 (Fatty acid desaturase), IPR005804 (Fatty acid desaturase domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformFeature_evidenceWBsf128213
VisibleGeneWBGene00001396
Corresponding_transcriptT13F2.1b.1
Corresponding_proteinCE44752
Corresponding_PCR_productcenix:38-d2
mv_T13F2.1
sjj_T13F2.1
smd_T13F2.1
Corresponding_oligo_set (14)
Matching_cDNA (27)
RNAi_result (13)
Microarray_results (16)
Brief_identificationDelta(5) fatty acid desaturase fat-4Accession_evidenceUniProtSP:G5EG11
RNASeq_FPKM (74)
Last_reviewed08 Apr 2014 00:00:00WBPerson4025
Remark[100304 gw3] Created this isoform based on the SL1 feature.Feature_evidenceWBsf128213
Methodcurated