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WormBase Tree Display for Sequence: F52H3

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Name Class

F52H3DNAF52H342632
SMapS_childGene_child (11)
CDS_child (241)
Transcript (17)
Nongenomicyk201c23238733664
yk276d91788318893
PCR_product (27)
AlleleWBVar003753002830628306
WBVar014002871968519686
WBVar007598831423414234
WBVar007598841423414234
WBVar003753012855928559
WBVar0131036362416241
WBVar014002882213322133
WBVar003753022872928729
WBVar0131036462916291
WBVar007598851423414234
WBVar0131036576787678
WBVar007598861431914319
WBVar003753032982629826
WBVar014002902420924209
WBVar0131036684198419
WBVar007598871442314423
WBVar003753043016330163
WBVar014002912641126411
WBVar0131036786838683
WBVar0125340634343434
WBVar003753053058130581
WBVar007598881457914579
WBVar014002924011840119
WBVar003753063061130611
WBVar007598891538315383
WBVar013103681017710177
WBVar013103691055710557
WBVar007598901545915459
WBVar003753073151031510
WBVar003753083163831638
WBVar007598911585415854
WBVar013103711149711497
WBVar007598921597515975
WBVar013103721225512255
WBVar003753093306033060
WBVar003753103381633816
WBVar007598931597615976
WBVar013103741231212312
WBVar007598941611516115
WBVar020069561759017591
WBVar013103751243712437
WBVar003753113403134031
WBVar013103771267912679
WBVar003753123532735327
WBVar002282371099010990
WBVar007598951627416274
WBVar012534171971819718
WBVar007598971688916889
WBVar013103791301613016
WBVar003753133542635426
WBVar003753143765137651
WBVar007598981690816908
WBVar013103831367513675
WBVar002282431220212202
WBVar013103851372813728
WBVar007598991701817018
WBVar003753153823438234
WBVar003753163877238772
WBVar012534282218222182
WBVar002282481304813048
WBVar013103871449514495
WBVar007599001708517085
WBVar0025192516421897
WBVar007599011725217252
WBVar014951163035730357
WBVar013103881533115331
WBVar003753173881738817
WBVar003753183965039650
WBVar013103891534615346
WBVar007599021732817328
WBVar002282521323113231
WBVar018951393124931249
WBVar003753193965039650
WBVar007599031746217462
WBVar013103901585615856
WBVar003753203980239802
WBVar007599041750917509
WBVar013103911592515925
WBVar012534392465624656
WBVar013103931723417234
WBVar013779222479724798
WBVar003753213995539955
WBVar007599051785417854
WBVar007599061788917889
WBVar002534122544825449
WBVar013103941800118001
WBVar003753224016140161
WBVar0213057569566956
WBVar013779342686326864
WBVar003753234022340223
WBVar007599071794717947
WBVar013103961807118071
WBVar007599081795517955
WBVar0213057698179817
WBVar003753244038440384
WBVar013103971887918879
WBVar003753254113641136
WBVar021305771576615766
WBVar013103981916819168
WBVar013779452909329094
WBVar007599091811118111
WBVar003753264156041560
WBVar021480682232722436
WBVar007599101815918159
WBVar013103991920419204
WBVar021305782216922169
WBVar021305793692636926
WBVar007599111848018480
WBVar002282681666016660
WBVar003753274162541625
WBVar013104001921219212
WBVar013104011957619576
WBVar021305804083940839
WBVar007599121853718537
WBVar003753284171541715
WBVar021305814215142151
WBVar007599131859318593
WBVar003753294219242192
WBVar013104021989319893
WBVar013104032053920539
WBVar007599141862318623
WBVar013104052112921129
WBVar007599151867218672
WBVar007599161917919179
WBVar013104072113921139
WBVar013104082152821528
WBVar007599171919519195
WBVar007599181923519235
WBVar013104092229522295
WBVar007599191936419364
WBVar013104102360523605
WBVar014392981932619326
WBVar007599201982919829
WBVar013104112446624466
WBVar019826451721317218
WBVar013104122477824778
WBVar014392991936219362
WBVar007599211995219952
WBVar01627133154154
WBVar007599222037820378
WBVar014393002122721227
WBVar013104132646326463
WBVar01627134239239
WBVar0162713552885288
WBVar007599232050520505
WBVar013104142655526555
WBVar014393012126121261
WBVar007599242064020640
WBVar014393073437934379
WBVar013104152683626836
WBVar0162713681968196
WBVar007599252066520665
WBVar002615303845038451
WBVar014393083649236492
WBVar016271371352613526
WBVar013104162759327593
WBVar016271381458914589
WBVar014393093649336493
WBVar013104182759927599
WBVar007599262076520765
WBVar013104192772627726
WBVar007599272151821518
WBVar016271391896018960
WBVar014393103652436524
WBVar013104202809428094
WBVar016271401896818968
WBVar007599282173421734
WBVar016271412751227512
WBVar013104212810228102
WBVar007599292200522005
WBVar0172050744364436
WBVar007599302200622006
WBVar013104222885328853
WBVar016271422937429374
WBVar000938843289733363
WBVar007599312208022080
WBVar000934672290424213
WBVar013104232897128971
WBVar0017489073157315
WBVar016271432937629376
WBVar017205081509515095
WBVar001748911101411014
WBVar016271442971829718
WBVar0010542744954495
WBVar007599322231422314
WBVar013104242953229532
WBVar017205092536725367
WBVar007599332257522575
WBVar013104252975229752
WBVar001748921275612756
WBVar016271453634036340
WBVar017205102805928059
WBVar001748952103621036
WBVar017205114024540245
WBVar016271464174741747
WBVar007599342274022740
WBVar013104262990529905
WBVar013104272999229992
WBVar001748962999829998
WBVar007599352289622896
WBVar016553771766417664
WBVar001748973074430744
WBVar007599362303823038
WBVar002414842708927089
WBVar002514101830819057
WBVar001748983331533315
WBVar007599372312623126
WBVar013104303077530775
WBVar013104313133631336
WBVar003180071039510395
WBVar001748993339633396
WBVar007599382330023300
WBVar001749003878738787
WBVar007599392358523585
WBVar013104323194131941
WBVar013104333196931969
WBVar001749013904039040
WBVar0055238261616161
WBVar007599402362323623
WBVar007599412433124331
WBVar005523851853918539
WBVar0147786041854186
WBVar001749024070240702
WBVar013104343210432104
WBVar0147786192479247
WBVar001054371347913479
WBVar013104353299832998
WBVar007599422447424474
WBVar013104373373733737
WBVar007599432459424594
WBVar019083131508515085
WBVar014778624193341934
WBVar001054381348013480
WBVar013104383378033780
WBVar007599442464224642
WBVar013104403380233802
WBVar007599452545125451
WBVar013104413381133811
WBVar007599462618726187
WBVar015385231086710867
WBVar002600803371133712
WBVar013104423405134051
WBVar007599472643426434
WBVar007599482652826528
WBVar013104443483334833
WBVar015385241168211682
WBVar00759764162162
WBVar020334831618116181
WBVar013104453494034940
WBVar007599492699726997
WBVar015385251801118011
WBVar007599502703927039
WBVar013104483722037220
WBVar015385261802818028
WBVar001054451721517215
WBVar00759765285285
WBVar00759766527527
WBVar013104493799337993
WBVar007599512706727067
WBVar019939762296722969
WBVar015385271803018030
WBVar015385283347633476
WBVar007599522708727087
WBVar013104513822638226
WBVar002970901039510395
WBVar00759767627627
WBVar002970911470914709
WBVar00759768633633
WBVar013104543915139151
WBVar015385293347733477
WBVar007599532721227212
WBVar002996113517135171
WBVar013104553931939319
WBVar007599542723827238
WBVar015385304145141451
WBVar00759769768768
WBVar015385314242942429
WBVar007599552735327353
WBVar014138291079010791
WBVar00759770876876
WBVar013104574038540385
WBVar002283252626726267
WBVar013104584141241412
WBVar007599562740227402
WBVar014138302621726218
WBVar0149793179948007
WBVar00759771928928
WBVar007599572762527625
WBVar014138312686026861
WBVar00759772934934
WBVar013104594176341763
WBVar00759773993993
WBVar007599582766127661
WBVar013104624228342283
WBVar0075977410671067
WBVar013104634236042360
WBVar007599592782127821
WBVar021098151027110327
WBVar015467181449214492
WBVar021098162685426860
WBVar015467191449714497
WBVar0075977511491149
WBVar013104644246342463
WBVar007599602783627836
WBVar007599612800328003
WBVar015467201526915269
WBVar0075977611501150
WBVar0075977713391339
WBVar015467212534825348
WBVar007599622807528075
WBVar007599632808728087
WBVar0075977813881388
WBVar0025069959886407
WBVar014975702217722311
WBVar0075977913951395
WBVar007599642810928109
WBVar0075978018201820
WBVar007599652823728237
WBVar007599662838128381
WBVar0075978118851885
WBVar002283423023030230
WBVar0075978219271927
WBVar007599672917129171
WBVar001054622976629766
WBVar001054633017630176
WBVar007599682929529295
WBVar0075978319651965
WBVar019892981079110791
WBVar007599692932429324
WBVar0075978419681968
WBVar019892991168811688
WBVar019893003372933730
WBVar0075978519681968
WBVar007599702968329683
WBVar007599712996529965
WBVar003217031039510395
WBVar019893014100441005
WBVar0075978621352135
WBVar0075978721512151
WBVar0207834196189750
WBVar007599722999729997
WBVar0075978821552155
WBVar007599732999729997
WBVar007599743007130071
WBVar0075978923732373
WBVar0025089457406553
WBVar0075979023952395
WBVar007599753034130341
WBVar0075979124302430
WBVar007599763063930639
WBVar019353281598015980
WBVar0075979225292529
WBVar007599773113831138
WBVar007599783118031180
WBVar019353291718117181
WBVar0075979325412541
WBVar019353301721517220
WBVar0075979426002600
WBVar007599793135431354
WBVar019353322953429535
WBVar007599803146731467
WBVar0075979530243024
WBVar007599813152731527
WBVar0075979630243024
WBVar018019251382813828
WBVar021129661408014081
WBVar019353333334833350
WBVar019353343778137781
WBVar018019261637916379
WBVar007599823169831698
WBVar0075979736973697
WBVar018019271968819688
WBVar019353353911839119
WBVar0075979840504050
WBVar007599833176631766
WBVar019353364187741879
WBVar0075979942594259
WBVar018019282421324213
WBVar007599843185931859
WBVar007599853192431924
WBVar0075980042914291
WBVar0075980143894389
WBVar007599863204632046
WBVar002283863695736957
WBVar0075980245414541
WBVar007599873242632426
WBVar002639853841038411
WBVar0075980345454545
WBVar007599883243232432
WBVar007599893258132581
WBVar0075980445504550
WBVar0075980545614561
WBVar007599903264632646
WBVar007599913267732677
WBVar0075980645614561
WBVar0075980745794579
WBVar007599923275432754
WBVar007599933290232902
WBVar0075980847354735
WBVar002284043977239772
WBVar007599943314633146
WBVar0075980951595159
WBVar002347871759417594
WBVar0075981052495249
WBVar020404331096210962
WBVar007599953335733357
WBVar020404341285912860
WBVar0124363022212221
WBVar007599963338833388
WBVar0075981154895489
WBVar007599973340933409
WBVar003017801465014650
WBVar0124363124822482
WBVar020404351352713527
WBVar0075981256925692
WBVar0075981357775777
WBVar020404361448114481
WBVar007599983352233522
WBVar012436331245712457
WBVar012436371352713527
WBVar020404371638216385
WBVar0075981458245824
WBVar007599993374233742
WBVar007600003377233772
WBVar0075981559815981
WBVar020404381909419094
WBVar020122781727417274
WBVar012436381409414094
WBVar0075981664446444
WBVar012436391700917009
WBVar020404413485234853
WBVar007600013432734327
WBVar007600023472234722
WBVar020404423937039371
WBVar0075981764796479
WBVar002284204117941179
WBVar0075981865406540
WBVar0026492099939994
WBVar012436411889018890
WBVar00375235172172
WBVar002284224124241242
WBVar007600033532235322
WBVar002284234126041260
WBVar007600043547135471
WBVar0075981966006600
WBVar00375236300300
WBVar012436422042120421
WBVar00375237530530
WBVar000890952653926539
WBVar0075982066266626
WBVar012436442420824208
WBVar007600053552635526
WBVar0075982168576857
WBVar007600063609636096
WBVar013940201226312263
WBVar000890972649626496
WBVar00375238708708
WBVar012436463103031030
WBVar012436473195231952
WBVar0037523911211121
WBVar0075982270087008
WBVar013940213485334853
WBVar007600073629836298
WBVar0037524017171717
WBVar012436493483034830
WBVar007600083654236542
WBVar0075982370257025
WBVar007600093655936559
WBVar0075982470257025
WBVar0037524124672467
WBVar013940233850738507
WBVar012436503568735687
WBVar0037524227362736
WBVar007600103659536595
WBVar013940244100541005
WBVar0075982571807180
WBVar012436523694836948
WBVar0037524339133913
WBVar0075982671987198
WBVar007600113675036750
WBVar012436533714937149
WBVar0075982773487348
WBVar0037524439673967
WBVar007600123676236762
WBVar0075982873647364
WBVar0037524539863986
WBVar012436543844538445
WBVar007600133705937059
WBVar020731621718017181
WBVar0037524642604260
WBVar012436584183241832
WBVar007600143724837248
WBVar0075982974137413
WBVar007600153727837278
WBVar0075983074157415
WBVar0037524744844484
WBVar007600163758037580
WBVar0037524846114611
WBVar0075983174967496
WBVar007600173761837618
WBVar0037524955045504
WBVar0075983280198019
WBVar0075983385938593
WBVar0037525056345634
WBVar007600183767837678
WBVar019106021458314583
WBVar0075983487228722
WBVar007600193772137721
WBVar0037525157335733
WBVar0075983588308830
WBVar0037525260236023
WBVar007600203774437744
WBVar007600213793337933
WBVar0037525362946294
WBVar0075983688828882
WBVar0037525467356735
WBVar0075983791089108
WBVar020848521759017591
WBVar007600223806038060
WBVar007600233807938079
WBVar020848534187841879
WBVar0037525571647164
WBVar0075983891749174
WBVar0075983992989298
WBVar007600243813638136
WBVar0037525671757175
WBVar0075984093619361
WBVar0037525775397539
WBVar007600253817638176
WBVar007600263826238262
WBVar0037525881318131
WBVar0075984194359435
WBVar0037525987048704
WBVar007600273833138331
WBVar0075984294829482
WBVar0075984394919491
WBVar002511331877819243
WBVar007600283840638406
WBVar0037526087538753
WBVar0075984495559555
WBVar0037526191099109
WBVar007600293850638506
WBVar01604545926926
WBVar007600303854838548
WBVar000937963255033004
WBVar0075984595559555
WBVar019434351126911332
WBVar0037526292129212
WBVar0037526396239623
WBVar0160454657505750
WBVar0075984695809580
WBVar007600313887638876
WBVar0075984796239623
WBVar007600323917339173
WBVar003752641000810008
WBVar016962551011710117
WBVar0160454792309230
WBVar016962561727617276
WBVar003752651211312113
WBVar016045481273712737
WBVar007600333922839228
WBVar0075984896809680
WBVar007600343959739597
WBVar0075984998159815
WBVar016045492574025740
WBVar016962571727717277
WBVar003752661214712147
WBVar016045503783637836
WBVar003752671328813288
WBVar007600353987939879
WBVar0075985099619961
WBVar016962582927229272
WBVar007598511041310413
WBVar003752681332313323
WBVar016962593732537325
WBVar007600364063340633
WBVar007598521043410434
WBVar007600374070640706
WBVar003752691341213412
WBVar003121851562615626
WBVar007600384105541055
WBVar007598531065510655
WBVar003752701420914209
WBVar003752711444314443
WBVar007598541072310723
WBVar007600394124641246
WBVar007598551132411324
WBVar003041271429014290
WBVar003752721446514465
WBVar007600404150141501
WBVar007600414180541805
WBVar007598561150411504
WBVar003752731447514475
WBVar014934161668316683
WBVar002982583517135171
WBVar002766551948119481
WBVar007598571150511505
WBVar003752741454714547
WBVar007600424188741887
WBVar007600434197141971
WBVar003752751590115901
WBVar002766562296622966
WBVar007598581168111681
WBVar002766573195931959
WBVar007600444209942099
WBVar007598591175111751
WBVar003752761610216102
WBVar007598601178611786
WBVar007600454221142211
WBVar002766583334133341
WBVar003752771622916229
WBVar018322591419214192
WBVar007598611180911809
WBVar007600464225842258
WBVar018322601419814198
WBVar003752781640816408
WBVar007598621185311853
WBVar003752791647116471
WBVar0164205519611961
WBVar007600474226142261
WBVar002511521810418496
WBVar016420561204812048
WBVar007600484233242332
WBVar003752801825318253
WBVar007598631200112001
WBVar003752811891818918
WBVar007598641225712257
WBVar007600494238942389
WBVar007598651227512275
WBVar003752821978919789
WBVar003752832030320303
WBVar020029682296722968
WBVar007598661234312343
WBVar007598671259612596
WBVar002385252953529535
WBVar003752842046420464
WBVar003752852075720757
WBVar007598681262012620
WBVar003752862102921029
WBVar007598691286012860
WBVar007598701297412974
WBVar003752872168521685
WBVar002577971957819579
WBVar003752882191621916
WBVar007598711300313003
WBVar007598721326213262
WBVar003752892243222432
WBVar007598731330013300
WBVar003752902327423274
WBVar007598741335913359
WBVar003752912408624086
WBVar020681703180831808
WBVar007598751336013360
WBVar003752922449024490
WBVar007598761337213372
WBVar003752932462924629
WBVar0022819923272327
WBVar003752942486224862
WBVar007598771384413844
WBVar01310352148148
WBVar003752952676226762
WBVar0131035321752175
WBVar007598781385713857
WBVar003198701039510395
WBVar007598791393713937
WBVar0131035642334233
WBVar0022820329232923
WBVar003752962680026800
WBVar003752972709227092
WBVar007598801420914209
WBVar0131035846564656
WBVar003752982737127371
WBVar0131035949924992
WBVar007598811422814228
WBVar014002861375013750
WBVar0131036053435343
WBVar007598821423014230
WBVar003752992738927389
Oligo_setAff_F52H3.12703924668
Aff_F52H3.22289922244
Aff_F52H3.33524934280
Aff_F52H3.43288533575
Aff_F52H3.52142622112
Aff_F52H3.61856217870
Aff_F52H3.718791113
Feature_object (482)
Feature_dataF52H3:Polysome142632
F52H3:TranscriptionallyActiveRegion142632
F52H3:ChIPSeqTF142632
F52H3:TRF142632
F52H3:Dust142632
F52H3:inverted142632
Homol_data (20)
StructureFromSourceCHROMOSOME_II
Overlap_rightC18D142533
Overlap_leftZK892
Clone_left_endF52H31
C18D142533
Clone_right_endZK8927399
DB_infoDatabaseEMBLNDB_ACZ66512
NDB_SVZ66512.1
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorGardner AE
From_laboratoryHX
Date_directory950529
SpeciesCaenorhabditis elegans
StrainWBStrain00000001
VisibleCloneF52H3
ReferenceWBPaper00022594
PropertiesGenomic_canonical
ChecksumMD59ba213dc4d961f13f9f06b7a395af06c
StatusFinished29 May 1995 00:00:00
Submitted26 Oct 1995 00:00:00
Annotated25 Oct 1995 00:00:00
MapSequence-IIEndsLeft5904
Right5936
Interpolated_map_positionII1.82486
Assembly_tagsClone left end14beginning of F52H3
4253342536beginning of C18D1
Clone right end73997402end of ZK892
annotation1030310314This region (12bp) not d.s. and covered by only one clone. Available read is terminated. This region was deleted from two other M13 clones. Size confirmed by cosmid and genomic PCRs.
1032410406This region (10324bp to 10405bp = approx 75bp) is not double-stranded and is covered by only one clone (which has been terminated). This is in the middle of an inverted repeat region and was found to be deleted in two other M13 clones. The size across the inverted repeat region was confirmed by cosmid and genomic PCRs using oligo pairs from outside the repeat region and inside the unique 'loop' of the repeat.
1410414306F52H3 : tandem repeats approx 13 copies of a 95mer Starts at 14104 bp CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGTTTAAAG CTGGCCCACAGTTTCCAAGAGAGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGATTAAAG CTGGCCCACAGTTTCAAAGAGTGTTCGGGCCTGCGgccCTCTAAC CTGGTTGGTAGGCTTGAGTGTACAACAGCATGCTTGAAATAAGATTATAA CCAGCTCACAGTTTCCAAGAGTGTTTGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGgcCcTCAAAC CTGGTTGGTACGCCTGAGCgAATAACAATCTGCTTTGAATTGGTTTAAAG CTGGCCCACAGTTTCCAAGAGTGTTCGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTgGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTgGGCCTGCGgCccTcAAAC CTGGTTGGTAGGCTTgAGCGAATAACAATCTGcTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGTtCGggcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTtgGgcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAaAG CTGGCCCACAGTTTCCAAGAGaGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGAtTAAAg CCAGCCCAGTTTCCAAGAGTAtTTGGGCCTGCGGCCCTCAAAC CTGGTTGgTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGtTcggGcctGCGGCCCTCAAAC CTGGTTGGTAGGcTTGAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGGCCCTCAAAC CTGGTTGGTACGCTTGAGCGAATAACAATCTGCTTTGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATtTGGGCCTGCGGCCCTCAAAC CTGGCTGGTAGGCTTGAGAAAATAACAATCTGCTTTGAATAGGTTTAaAG CTGGcCCACAGtTTCCAAGATTGTTCCCTCAAAC CTGGTTGTTGGCTTAGAAT Finishes at around 15430 bp Size confirmed by cosmid and genomic PCRs.
1430614615F52H3 : tandem repeats approx 13 copies of a 95mer Starts at 14104 bp CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGTTTAAAG CTGGCCCACAGTTTCCAAGAGAGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGATTAAAG CTGGCCCACAGTTTCAAAGAGTGTTCGGGCCTGCGgccCTCTAAC CTGGTTGGTAGGCTTGAGTGTACAACAGCATGCTTGAAATAAGATTATAA CCAGCTCACAGTTTCCAAGAGTGTTTGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGgcCcTCAAAC CTGGTTGGTACGCCTGAGCgAATAACAATCTGCTTTGAATTGGTTTAAAG CTGGCCCACAGTTTCCAAGAGTGTTCGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTgGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTgGGCCTGCGgCccTcAAAC CTGGTTGGTAGGCTTgAGCGAATAACAATCTGcTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGTtCGggcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTtgGgcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAaAG CTGGCCCACAGTTTCCAAGAGaGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGAtTAAAg CCAGCCCAGTTTCCAAGAGTAtTTGGGCCTGCGGCCCTCAAAC CTGGTTGgTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGtTcggGcctGCGGCCCTCAAAC CTGGTTGGTAGGcTTGAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGGCCCTCAAAC CTGGTTGGTACGCTTGAGCGAATAACAATCTGCTTTGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATtTGGGCCTGCGGCCCTCAAAC CTGGCTGGTAGGCTTGAGAAAATAACAATCTGCTTTGAATAGGTTTAaAG CTGGcCCACAGtTTCCAAGATTGTTCCCTCAAAC CTGGTTGTTGGCTTAGAAT Finishes at around 15430 bp Size confirmed by cosmid and genomic PCRs.
1503715093Region of poor d.s. (+) but sequence confirmed by terminator on opposite strand (14740 to 14790 bp : 50bp). Also : this is in the middle of a set of tandem repeats covering approx 2kb.
1461615038F52H3 : tandem repeats approx 13 copies of a 95mer Starts at 14104bp CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGTTTAAAG CTGGCCCACAGTTTCCAAGAGAGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGATTAAAG CTGGCCCACAGTTTCAAAGAGTGTTCGGGCCTGCGgccCTCTAAC CTGGTTGGTAGGCTTGAGTGTACAACAGCATGCTTGAAATAAGATTATAA CCAGCTCACAGTTTCCAAGAGTGTTTGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGgcCcTCAAAC CTGGTTGGTACGCCTGAGCgAATAACAATCTGCTTTGAATTGGTTTAAAG CTGGCCCACAGTTTCCAAGAGTGTTCGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTgGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTgGGCCTGCGgCccTcAAAC CTGGTTGGTAGGCTTgAGCGAATAACAATCTGcTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGTtCGggcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTtgGgcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAaAG CTGGCCCACAGTTTCCAAGAGaGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGAtTAAAg CCAGCCCAGTTTCCAAGAGTAtTTGGGCCTGCGGCCCTCAAAC CTGGTTGgTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGtTcggGcctGCGGCCCTCAAAC CTGGTTGGTAGGcTTGAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGGCCCTCAAAC CTGGTTGGTACGCTTGAGCGAATAACAATCTGCTTTGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATtTGGGCCTGCGGCCCTCAAAC CTGGCTGGTAGGCTTGAGAAAATAACAATCTGCTTTGAATAGGTTTAaAG CTGGcCCACAGtTTCCAAGATTGTTCCCTCAAAC CTGGTTGTTGGCTTAGAAT Finishes at around 15430bp Size confirmed by cosmid and genomic PCRs
1503815429F52H3 : tandem repeats approx 13 copies of a 95mer Starts at 14104 bp CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGTTTAAAG CTGGCCCACAGTTTCCAAGAGAGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATATACTTGGAATAGGATTAAAG CTGGCCCACAGTTTCAAAGAGTGTTCGGGCCTGCGgccCTCTAAC CTGGTTGGTAGGCTTGAGTGTACAACAGCATGCTTGAAATAAGATTATAA CCAGCTCACAGTTTCCAAGAGTGTTTGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGgcCcTCAAAC CTGGTTGGTACGCCTGAGCgAATAACAATCTGCTTTGAATTGGTTTAAAG CTGGCCCACAGTTTCCAAGAGTGTTCGGGCCTGCGgccCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTgGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTgGGCCTGCGgCccTcAAAC CTGGTTGGTAGGCTTgAGCGAATAACAATCTGcTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGTtCGggcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTtgGgcctGCGGCCCTCAAAC CTGGTTGGTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAaAG CTGGCCCACAGTTTCCAAGAGaGTTCGGGCCTGCGGCCCTCAAAC CTGGTTGGTAGGCTTAAGCGAATAACAATCTGCTTGGAATAGGAtTAAAg CCAGCCCAGTTTCCAAGAGTAtTTGGGCCTGCGGCCCTCAAAC CTGGTTGgTAGGCTTGAGCGAATAACAATCTGCTTGGAACAGGATTAAAG CTGGCCCACAGTTTCCAAGAGTGtTcggGcctGCGGCCCTCAAAC CTGGTTGGTAGGcTTGAGCGAATAACAATCTGCTTGGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATTTGGGCCTGCGGCCCTCAAAC CTGGTTGGTACGCTTGAGCGAATAACAATCTGCTTTGAATAGGATTAAAG CCAGCCCAGTTTCCAAGAGTATtTGGGCCTGCGGCCCTCAAAC CTGGCTGGTAGGCTTGAGAAAATAACAATCTGCTTTGAATAGGTTTAaAG CTGGcCCACAGtTTCCAAGATTGTTCCCTCAAAC CTGGTTGTTGGCTTAGAAT Finishes at around 15430 bp. Size confirmed by cosmid and genomic PCRs.
2460624607A single M13 read was missing 2bp (CA) All other reads (5 +/6-) agree
MethodGenomic_canonical