WormBase Tree Display for Sequence: C18D1
expand all nodes | collapse all nodes | view schema
C18D1 | DNA | C18D1 | 42310 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (15) | ||||
CDS_child (86) | ||||||
Transcript (17) | ||||||
Genomic_non_canonical | WRM064bB08 | 1065 | 39211 | |||
PCR_product (14) | ||||||
Allele (645) | ||||||
Oligo_set | Aff_C18D1.1 | 11490 | 10793 | |||
Aff_C18D1.2 | 6898 | 7681 | ||||
Aff_C18D1.3 | 3327 | 4046 | ||||
Feature_object (206) | ||||||
Feature_data | C18D1:Polysome | 1 | 42310 | |||
C18D1:TranscriptionallyActiveRegion | 1 | 42310 | ||||
C18D1:ChIPSeqTF | 1 | 42310 | ||||
C18D1:TRF | 1 | 42310 | ||||
C18D1:Dust | 1 | 42310 | ||||
C18D1:inverted | 1 | 42310 | ||||
Homol_data (19) | ||||||
Structure | From | Source | CHROMOSOME_II | |||
Overlap_right | ZK945 | 42207 | ||||
Overlap_left | F52H3 | |||||
Clone_left_end | C18D1 | 1 | ||||
ZK945 | 42207 | |||||
Clone_right_end | F52H3 | 1981 | ||||
DB_info | Database | EMBL | NDB_AC | Z48543 | ||
NDB_SV | Z48543.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Berks M | ||||
From_laboratory | HX | |||||
Date_directory | 941124 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | C18D1 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 28df16374358f1ba01bfc773e83ae3a7 | ||||
Status | Finished | 24 Nov 1994 00:00:00 | ||||
Submitted | 01 Mar 1995 00:00:00 | |||||
Annotated | 28 Feb 1995 00:00:00 | |||||
Map | Sequence-II | Ends | Left | 5933 | ||
Right | 5960 | |||||
Interpolated_map_position | II | 1.87519 | ||||
Assembly_tags | annotation | 1 | 4 | beginning of C18D1 | ||
1978 | 1981 | end of F52H3 | ||||
5611 | 5616 | most M13 clones have only 2 copies of the TAC repeat (4 negative and 3 positive clones). A single clone had 3 copies of TAC : possibly an M13 cloning error (terminator reactions confirmed original reads) | ||||
42302 | 42316 | ?edit to here | ||||
42207 | 42210 | beginning of ZK945 | ||||
Method | Genomic_canonical |