WormBase Tree Display for CDS: F38A5.10
expand all nodes | collapse all nodes | view schema
| F38A5.10 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F38A5 | ||
| Structure | Source_exons | 1 | 195 | ||
| 245 | 298 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | Q94210 | |
| UniProt | UniProtAcc | Q94210 | |||
| UniProt_GCRP | UniProtAcc | Q94210 | |||
| AlphaFold | entry | Q94210 | |||
| NCBI_protein | GI_number | GI:351059588 | |||
| TREEFAM | TREEFAM_ID | TF319426 | |||
| Protein_id | CHROMOSOME_IV | CCD67177 | 1 | ||
| DB_remark | NSPB-4 protein; contains similarity to Pfam domain PF07312 (Protein of unknown function (DUF1459)); contains similarity to Interpro domain IPR009924 (Protein of unknown function DUF1459) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | WBGene00018167 | |||
| Corresponding_transcript | F38A5.10.1 | ||||
| Corresponding_protein | CE10044 | ||||
| Corresponding_PCR_product | cenix:238-g7 | ||||
| mv_F38A5.10 | |||||
| sjj_F38A5.10 | |||||
| Corresponding_oligo_set | 18538033 | ||||
| 18552320 | |||||
| 18552344 | |||||
| A_12_P107539 | |||||
| Aff_F38A5.10 | |||||
| GPL8304_CE_WBGene00018167_A | |||||
| GPL8673_F38A5_10P00113 | |||||
| GPL8673_F38A5_10P00123 | |||||
| GPL9450_F38A5.10 | |||||
| cea2.d.24330 | |||||
| Matching_cDNA | L2_Nanopore_Roach_42560 | Inferred_automatically | transcript_builder.pl | ||
| L4_Nanopore_Roach_25638 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_245296 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00008764 | ||||
| WBRNAi00025434 | |||||
| WBRNAi00069426 | |||||
| WBRNAi00085531 | |||||
| WBRNAi00014533 | |||||
| WBRNAi00046668 | |||||
| WBRNAi00014526 | |||||
| WBRNAi00031940 | |||||
| WBRNAi00014524 | |||||
| WBRNAi00046674 | |||||
| Microarray_results | SMD_F38A5.10 | ||||
| A_12_P107539 | |||||
| Aff_F38A5.10 | |||||
| GPL8304_CE_WBGene00018167_A | |||||
| GPL8673_F38A5_10P00113 | |||||
| GPL8673_F38A5_10P00123 | |||||
| GPL9450_F38A5.10 | |||||
| cea2.d.24330 | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 15 Oct 2013 00:00:00 | WBPerson4025 | |||
| Method | curated |
