WormBase Tree Display for CDS: F27C8.1
expand all nodes | collapse all nodes | view schema
| F27C8.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F27C8 | |||
| Structure | Source_exons | 1 | 178 | |||
| 350 | 655 | |||||
| 742 | 867 | |||||
| 915 | 1068 | |||||
| 1303 | 1693 | |||||
| 1822 | 1993 | |||||
| 2042 | 2134 | |||||
| 2200 | 2261 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q19834 | ||
| UniProt | UniProtAcc | Q19834 | ||||
| UniProt_GCRP | UniProtAcc | Q19834 | ||||
| AlphaFold | entry | Q19834 | ||||
| NCBI_protein | GI_number | GI:3876345 | ||||
| Protein_id | CHROMOSOME_IV | CAA92459 | 1 | |||
| DB_remark | AAT-1 protein; contains similarity to Pfam domain PF13520 (Amino acid permease); contains similarity to Interpro domain IPR002293 (Amino acid/polyamine transporter I) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000002 | ||||
| Corresponding_transcript | F27C8.1.1 | |||||
| Corresponding_protein | CE03266 | |||||
| Corresponding_PCR_product | cenix:38-c8 | |||||
| mv_F27C8.1 | ||||||
| sjj_F27C8.1 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (39) | ||||||
| RNAi_result | WBRNAi00087502 | |||||
| WBRNAi00045732 | ||||||
| WBRNAi00031488 | ||||||
| WBRNAi00113611 | ||||||
| WBRNAi00013991 | ||||||
| WBRNAi00112392 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Large neutral amino acids transporter small subunit 1 | Accession_evidence | UniProt | TR:Q19834 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 08 Apr 2014 00:00:00 | WBPerson4025 | ||||
| Associated_feature | WBsf006262 | |||||
| Method | curated |
