Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: F15E11.12a

expand all nodes | collapse all nodes | view schema

Name Class

F15E11.12aSMapS_parentSequenceF15E11
StructureSource_exons1259
301530
DB_infoDatabaseTrEMBLUniProtAccM1ZJ62
UniProtUniProtAccM1ZJ62
UniProt_GCRPUniProtAccM1ZJ62
AlphaFoldentryM1ZJ62
NCBI_proteinGI_numberGI:459683618
Protein_idCHROMOSOME_VCCU833581
DB_remarkPUD-4 protein; contains similarity to Pfam domain PF18457 (Up-Regulated in long-lived daf-2); contains similarity to Interpro domain IPR041157 (Up-regulated in Daf-2)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformProtein_id_evidenceWP:CE25224
Feature_evidenceWBsf022936
VisibleGeneWBGene00017498
Corresponding_transcriptF15E11.12a.1
Corresponding_proteinCE25859
Corresponding_PCR_productcenix:55-a8
mv_F15E11.g
mv_F15E11.i
sjj_F15E11.12
Corresponding_oligo_set (15)
Matching_cDNA (20)
RNAi_resultWBRNAi00092883
WBRNAi00031006
WBRNAi00097112
WBRNAi00013374
WBRNAi00070124
WBRNAi00097102
WBRNAi00044729
Microarray_results (18)
Brief_identificationUp-regulated in Daf-2 domain-containing proteinAccession_evidenceUniProtTR:M1ZJ62
RNASeq_FPKM (74)
Last_reviewed13 Aug 2015 00:00:00WBPerson4025
Remarksplit F12E11.14 off this 2000-03-14
[20000314 js] this was split into this gene and F15E11.14 based on EST data -Curator_confirmedWBPerson615
modified 5' exon based on est data.
[20031030 tb] overlaps F15E11.15 on opposite strand, but both are supported by data.Curator_confirmedWBPerson1849
WBPerson615
[20130227 js] moved the start site based on TSL sequences on RNASeq reads and protein alignments, and changed name from F15E11.12 -> F15E11.12a when new isoform was createdProtein_id_evidenceWP:CE25224
Feature_evidenceWBsf022936
Methodcurated