WormBase Tree Display for CDS: F15E11.12a
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F15E11.12a | SMap | S_parent | Sequence | F15E11 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 259 | |||
301 | 530 | |||||
DB_info | Database | TrEMBL | UniProtAcc | M1ZJ62 | ||
UniProt | UniProtAcc | M1ZJ62 | ||||
UniProt_GCRP | UniProtAcc | M1ZJ62 | ||||
AlphaFold | entry | M1ZJ62 | ||||
NCBI_protein | GI_number | GI:459683618 | ||||
Protein_id | CHROMOSOME_V | CCU83358 | 1 | |||
DB_remark | PUD-4 protein; contains similarity to Pfam domain PF18457 (Up-Regulated in long-lived daf-2); contains similarity to Interpro domain IPR041157 (Up-regulated in Daf-2) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Protein_id_evidence | WP:CE25224 | ||||
Feature_evidence | WBsf022936 | |||||
Visible | Gene | WBGene00017498 | ||||
Corresponding_transcript | F15E11.12a.1 | |||||
Corresponding_protein | CE25859 | |||||
Corresponding_PCR_product | cenix:55-a8 | |||||
mv_F15E11.g | ||||||
mv_F15E11.i | ||||||
sjj_F15E11.12 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (20) | ||||||
RNAi_result | WBRNAi00092883 | |||||
WBRNAi00031006 | ||||||
WBRNAi00097112 | ||||||
WBRNAi00013374 | ||||||
WBRNAi00070124 | ||||||
WBRNAi00097102 | ||||||
WBRNAi00044729 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Up-regulated in Daf-2 domain-containing protein | Accession_evidence | UniProt | TR:M1ZJ62 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 13 Aug 2015 00:00:00 | WBPerson4025 | ||||
Remark | split F12E11.14 off this 2000-03-14 | |||||
[20000314 js] this was split into this gene and F15E11.14 based on EST data - | Curator_confirmed | WBPerson615 | ||||
modified 5' exon based on est data. | ||||||
[20031030 tb] overlaps F15E11.15 on opposite strand, but both are supported by data. | Curator_confirmed | WBPerson1849 | ||||
WBPerson615 | ||||||
[20130227 js] moved the start site based on TSL sequences on RNASeq reads and protein alignments, and changed name from F15E11.12 -> F15E11.12a when new isoform was created | Protein_id_evidence | WP:CE25224 | ||||
Feature_evidence | WBsf022936 | |||||
Method | curated |