WormBase Tree Display for CDS: F02A9.6
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| F02A9.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | |||
| Structure | Source_exons | 1 | 140 | |||
| 1001 | 1116 | |||||
| 1757 | 1819 | |||||
| 2339 | 3247 | |||||
| 3548 | 3788 | |||||
| 4094 | 4829 | |||||
| 5237 | 5709 | |||||
| 5760 | 6843 | |||||
| 6895 | 7020 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P13508 | ||
| UniProt | UniProtAcc | P13508 | ||||
| UniProt_GCRP | UniProtAcc | P13508 | ||||
| AlphaFold | entry | P13508 | ||||
| NCBI_protein | GI_number | GI:3875450 | ||||
| TREEFAM | TREEFAM_ID | TF351641 | ||||
| Protein_id | CHROMOSOME_III | CAA79620 | 1 | |||
| DB_remark | GLP-1 protein; contains similarity to Pfam domains PF00008 (EGF-like domain), PF00023 (Ankyrin repeat), PF00066 (LNR domain), PF06816 (NOTCH protein), PF07684 (NOTCH protein), PF12796 (Ankyrin repeats (3 copies)); contains similarity to Interpro domains IPR011656 (Notch, NODP domain), IPR002110 (Ankyrin repeat), IPR001881 (EGF-like calcium-binding domain), IPR000800 (Notch domain), IPR035993 (Notch-like domain superfamily), IPR000742 (EGF-like domain), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR010660 (Notch, NOD domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00001609 | ||||
| Corresponding_transcript | F02A9.6.1 | |||||
| Corresponding_protein | CE00237 | |||||
| Corresponding_PCR_product | TH:320A6 | |||||
| TH:335D6 | ||||||
| cenix:320-a6 | ||||||
| cenix:335-d6 | ||||||
| mv_AAA28058 | ||||||
| sjj_F02A9.6 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (48) | ||||||
| RNAi_result | WBRNAi00068864 | |||||
| WBRNAi00110325 | ||||||
| WBRNAi00008602 | ||||||
| WBRNAi00101715 | ||||||
| WBRNAi00079052 | ||||||
| WBRNAi00068376 | ||||||
| WBRNAi00106567 | ||||||
| WBRNAi00079059 | ||||||
| WBRNAi00083921 | ||||||
| WBRNAi00043790 | ||||||
| WBRNAi00117248 | ||||||
| WBRNAi00081028 | ||||||
| WBRNAi00088853 | ||||||
| WBRNAi00068378 | ||||||
| WBRNAi00079058 | ||||||
| WBRNAi00043791 | ||||||
| WBRNAi00068377 | ||||||
| WBRNAi00088852 | ||||||
| WBRNAi00059465 | ||||||
| WBRNAi00066215 | ||||||
| WBRNAi00088851 | ||||||
| WBRNAi00075673 | ||||||
| WBRNAi00088844 | ||||||
| WBRNAi00094604 | ||||||
| WBRNAi00079055 | ||||||
| WBRNAi00083922 | ||||||
| WBRNAi00086446 | ||||||
| WBRNAi00084004 | ||||||
| WBRNAi00068862 | ||||||
| WBRNAi00001541 | ||||||
| WBRNAi00094605 | ||||||
| WBRNAi00096991 | ||||||
| WBRNAi00079039 | ||||||
| WBRNAi00079056 | ||||||
| WBRNAi00081062 | ||||||
| WBRNAi00091401 | ||||||
| WBRNAi00002568 | ||||||
| WBRNAi00086447 | ||||||
| WBRNAi00081746 | ||||||
| WBRNAi00078931 | ||||||
| WBRNAi00064713 | ||||||
| WBRNAi00096932 | ||||||
| WBRNAi00086445 | ||||||
| WBRNAi00083923 | ||||||
| WBRNAi00079057 | ||||||
| WBRNAi00088846 | ||||||
| WBRNAi00002691 | ||||||
| WBRNAi00066150 | ||||||
| WBRNAi00078954 | ||||||
| WBRNAi00068863 | ||||||
| WBRNAi00110323 | ||||||
| WBRNAi00007525 | ||||||
| WBRNAi00088847 | ||||||
| WBRNAi00096933 | ||||||
| WBRNAi00006312 | ||||||
| WBRNAi00078965 | ||||||
| WBRNAi00025004 | ||||||
| WBRNAi00079054 | ||||||
| WBRNAi00064568 | ||||||
| WBRNAi00064742 | ||||||
| WBRNAi00088850 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | glp-1/Notch intracellular domain | Accession_evidence | UniProt | SP:P13508 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf027615 | |||||
| Method | curated |
