WormBase Tree Display for CDS: DC2.3g
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| DC2.3g | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | DC2 | |||
| Structure | Source_exons | 1 | 27 | |||
| 92 | 346 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A0K3AXP2 | ||
| UniProt | UniProtAcc | A0A0K3AXP2 | ||||
| AlphaFold | entry | A0A0K3AXP2 | ||||
| NCBI_protein | GI_number | GI:919009009 | ||||
| Protein_id | CHROMOSOME_V | CTQ86768 | 1 | |||
| DB_remark | LEC-12 protein; contains similarity to Pfam domain PF00337 (Galactoside-binding lectin); contains similarity to Interpro domains IPR001079 (Galectin, carbohydrate recognition domain), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Curator_confirmed | WBPerson4025 | ||||
| Feature_evidence | WBsf130611 | |||||
| Visible | Gene | WBGene00017080 | ||||
| Corresponding_transcript | DC2.3g.1 | |||||
| Corresponding_protein | CE50794 | |||||
| Corresponding_oligo_set | 175023_at | |||||
| GPL13394_WBGene00017080 | ||||||
| GPL13914_DC2.3 | ||||||
| GPL14144_DC2.3b_865-924_0.935_1_C | ||||||
| GPL19516_CGZ0013933 | ||||||
| GPL21109_DC2.3b | ||||||
| GPL8304_CE_WBGene00017080_A | ||||||
| GPL8673_DC2_3bP01121 | ||||||
| GPL9450_DC2.3 | ||||||
| cea2.p.111948 | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_1543 | |||||
| L2_Nanopore_Roach_2121 | ||||||
| male_Nanopore_Roach_1111 | ||||||
| L1_Nanopore_Roach_2155 | ||||||
| L3_Nanopore_Roach_1727 | ||||||
| L4_Nanopore_Roach_1232 | ||||||
| Microarray_results | 175023_at | |||||
| GPL13394_WBGene00017080 | ||||||
| GPL13914_DC2.3 | ||||||
| GPL14144_DC2.3b_865-924_0.935_1_C | ||||||
| GPL19516_CGZ0013933 | ||||||
| GPL21109_DC2.3b | ||||||
| GPL8304_CE_WBGene00017080_A | ||||||
| GPL8673_DC2_3bP01121 | ||||||
| GPL9450_DC2.3 | ||||||
| cea2.p.111948 | ||||||
| Brief_identification | Galectin | Accession_evidence | UniProt | TR:A0A0K3AXP2 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 16 Apr 2015 00:00:00 | WBPerson4025 | ||||
| Remark | [150416 gw3] Created this isoform based on the RNASeq splice data and the SL1 site. | Curator_confirmed | WBPerson4025 | |||
| Feature_evidence | WBsf130611 | |||||
| From_analysis | RNASeq | |||||
| Method | curated |
