WormBase Tree Display for CDS: C56A3.7d

C56A3.7d SMap: S_parent: Sequence: C56A3
  Structure: Source_exons: 1 72
      416 508
      558 647
      1312 1382
      1578 1713
      2165 2242
      2285 2407
      2460 2642
  DB_info: Database: SwissProt UniProtAcc Q18879
        UniProtIsoformAcc Q18879-4
      UniProt UniProtAcc Q18879
      UniProt_GCRP UniProtAcc Q18879
      AlphaFold entry Q18879
      NCBI_protein GI_number GI:345107377
    Protein_id: CHROMOSOME_V CCD31049 1
    DB_remark: CAV-2 protein; contains similarity to Pfam domain PF01146 (Caveolin); contains similarity to Interpro domain IPR001612 (Caveolin)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: From_analysis: RNASeq_Hillier_elegans
  Visible: Gene: WBGene00000302
    Corresponding_transcript: C56A3.7d.1
    Corresponding_protein: CE46485
    Corresponding_PCR_product: cenix:84-c4
      mv_AAB48299
      sjj_C56A3.7
    Corresponding_oligo_set (17)
    Matching_cDNA: male_Nanopore_Roach_128048
      young_adult_Nanopore_Roach_69995
      L1_Nanopore_Roach_3549
      L2_Nanopore_Roach_3961
      L3_Nanopore_Roach_52805
    RNAi_result: WBRNAi00043257
      WBRNAi00102916
      WBRNAi00102917
      WBRNAi00102909
      WBRNAi00027704
      WBRNAi00012452
      WBRNAi00102915
      WBRNAi00102910
    Microarray_results (21)
    Brief_identification: Caveolin-2 Accession_evidence: UniProt SP:Q18879
    RNASeq_FPKM (74)
    Last_reviewed: 18 Jul 2011 00:00:00 WBPerson4025
    Remark: [110718 gw3] Created this isoform with the secong exon removed from the RNASeq intron data. From_analysis: RNASeq_Hillier_elegans
  Method: curated