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WormBase Tree Display for CDS: C55B7.4a

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Name Class

C55B7.4aEvidenceInferred_automaticallymake_isoforms.pl
Feature_evidenceWBsf949221
SMapS_parentSequenceC55B7
StructureSource_exons1175
222322
6301073
11231219
12651410
14571594
18302012
DB_infoDatabaseTrEMBLUniProtAccH2KZG6
UniProtUniProtAccH2KZG6
UniProt_GCRPUniProtAccH2KZG6
AlphaFoldentryH2KZG6
NCBI_proteinGI_numberGI:351060422
TREEFAMTREEFAM_IDTF105055
Protein_idCHROMOSOME_ICCD680911
DB_remarkACDH-1 protein; contains similarity to Pfam domains PF00441 (Acyl-CoA dehydrogenase, C-terminal domain), PF02770 (Acyl-CoA dehydrogenase, middle domain), PF02771 (Acyl-CoA dehydrogenase, N-terminal domain); contains similarity to Interpro domains IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA oxidase/dehydrogenase, middle domain), IPR036250 (Acyl-CoA dehydrogenase-like, C-terminal), IPR037069 (Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily), IPR046373 (Acyl-CoA oxidase/dehydrogenase, middle domain superfamily), IPR009100 (Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily), IPR009075 (Acyl-CoA dehydrogenase/oxidase, C-terminal)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBLBJ776343
VisibleGeneWBGene00016943
Corresponding_transcriptC55B7.4a.1
Corresponding_proteinCE09015
Corresponding_PCR_productcenix:71-c7
mv_C55B7.4
sjj_C55B7.4
Corresponding_oligo_set (26)
Matching_cDNA (314)
RNAi_result (14)
Microarray_results (32)
Brief_identificationShort/branched chain specific acyl-CoA dehydrogenase, mitochondrialAccession_evidenceUniProtTR:H2KZG6
RNASeq_FPKM (74)
Methodcurated