WormBase Tree Display for Sequence: C54G6
expand all nodes | collapse all nodes | view schema
| C54G6 | DNA | C54G6 | 27396 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00016930 | 23527 | 20443 | |
| WBGene00005002 | 25477 | 26248 | ||||
| WBGene00016932 | 4853 | 14712 | ||||
| WBGene00236808 | 24814 | 24267 | ||||
| WBGene00196934 | 5279 | 5727 | ||||
| WBGene00199650 | 5648 | 5349 | ||||
| WBGene00016931 | 15249 | 20522 | ||||
| CDS_child (133) | ||||||
| Transcript | C54G6.6 | 5279 | 5727 | |||
| C54G6.7 | 5648 | 5349 | ||||
| C54G6.1a.1 | 23527 | 20443 | ||||
| C54G6.1b.1 | 23380 | 20585 | ||||
| C54G6.2a.1 | 15249 | 20522 | ||||
| C54G6.2b.1 | 18622 | 19837 | ||||
| C54G6.2c.1 | 19301 | 19837 | ||||
| C54G6.3.1 | 4853 | 14712 | ||||
| C54G6.5.1 | 25477 | 26248 | ||||
| C54G6.8.1 | 24814 | 24267 | ||||
| Nongenomic | yk362a4 | 20516 | 23371 | |||
| PCR_product (19) | ||||||
| Allele (586) | ||||||
| Oligo_set | Aff_C54G6.1 | 23040 | 20585 | |||
| Aff_C54G6.2 | 17500 | 19837 | ||||
| Aff_C54G6.3 | 5117 | 6498 | ||||
| Feature_object (144) | ||||||
| Feature_data | C54G6:Polysome | 1 | 27396 | |||
| C54G6:TranscriptionallyActiveRegion | 1 | 27396 | ||||
| C54G6:ChIPSeqTF | 1 | 27396 | ||||
| C54G6:TRF | 1 | 27396 | ||||
| C54G6:Dust | 1 | 27396 | ||||
| C54G6:inverted | 1 | 27396 | ||||
| Homol_data (16) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | Y34D9A | 27197 | ||||
| Overlap_left | F54A5 | |||||
| Clone_left_end | C54G6 | 1 | ||||
| Clone_right_end | Y95B8A | 3289 | ||||
| C54G6 | 27396 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080951 | ||
| NDB_ID | _AF043698 | |||||
| NDB_SV | FO080951.2 | |||||
| Secondary_accession | AF043698 | |||||
| DB_remark | The 5' clone is F54A5, 1000 bp overlap; the 3' clone is Y34D9A, 200 bp overlap. Actual start of this clone is at base position 1 of C54G6; actual end is at 27396 of C54G6. | |||||
| [121025] Sequence correction: SNP 0 bases @ 18278 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wilson R | ||||
| Tin-Wollam A | ||||||
| Graves T | ||||||
| Ozersky P | ||||||
| From_laboratory | RW | |||||
| Date | 18 Feb 1998 00:00:00 | |||||
| 18 Oct 1996 00:00:00 | ||||||
| Date_directory | 961014 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C54G6 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 00b4f228463295ce3e6d58cb74712f9b | ||||
| Status | Finished | |||||
| Submitted | 18 Feb 1998 00:00:00 | |||||
| Map | Sequence-I | |||||
| Interpolated_map_position | I | -17.4107 | ||||
| Method | Genomic_canonical |
