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WormBase Tree Display for Transcript: C17H1.4b

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Name Class

C17H1.4bSMapS_parentSequenceC17H1
StructureSource_exons124
70285
394648
7521132
28093012
37363990
40804457
45924939
DB_infoDB_remarknon-protein coding RNA pals-3
DatabaseRNAcentralURSidURS0000843376
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
VisibleGeneWBGene00007657
Corresponding_PCR_productcenix:22-g6
mv_C17H1.4
sjj_C17H1.4
Corresponding_oligo_set (19)
RNAi_resultWBRNAi00070111
WBRNAi00002981
WBRNAi00040847
Microarray_results (20)
Brief_identificationnon-coding Transcript Isoform
Last_reviewed25 Feb 2015 00:00:00WBPerson1983
Remark[150225 pad] Created this non_coding_transcript Isoform to show that at a low frequency transcription starts at the beginning of this gene and continues to the end of the next gene on this strand utilising novel splicing to skip the final exon of C17H1.4 and the 1st exon of C17H1.14. This exon skipping is seen in 2 ESTs and at low levels in the RNASeq spliced read data. The paralogs of this gene occur as a stand alone gene loci as well as a second example where a similar event can be seen at extremely low levels.Accession_evidenceNDBFN894534
FN894535
Curator_confirmedWBPerson1983
From_analysisRNASeq
PropertiesTranscriptncRNA
IsoformCurator_confirmedWBPerson1983
Methodnon_coding_transcript