WormBase Tree Display for Transcript: C17H1.4b
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C17H1.4b | SMap | S_parent | Sequence | C17H1 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 24 | |||
70 | 285 | |||||
394 | 648 | |||||
752 | 1132 | |||||
2809 | 3012 | |||||
3736 | 3990 | |||||
4080 | 4457 | |||||
4592 | 4939 | |||||
DB_info | DB_remark | non-protein coding RNA pals-3 | ||||
Database | RNAcentral | URSid | URS0000843376 | |||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Visible | Gene | WBGene00007657 | ||||
Corresponding_PCR_product | cenix:22-g6 | |||||
mv_C17H1.4 | ||||||
sjj_C17H1.4 | ||||||
Corresponding_oligo_set (19) | ||||||
RNAi_result (3) | ||||||
Microarray_results (20) | ||||||
Brief_identification | non-coding Transcript Isoform | |||||
Last_reviewed | 25 Feb 2015 00:00:00 | WBPerson1983 | ||||
Remark | [150225 pad] Created this non_coding_transcript Isoform to show that at a low frequency transcription starts at the beginning of this gene and continues to the end of the next gene on this strand utilising novel splicing to skip the final exon of C17H1.4 and the 1st exon of C17H1.14. This exon skipping is seen in 2 ESTs and at low levels in the RNASeq spliced read data. The paralogs of this gene occur as a stand alone gene loci as well as a second example where a similar event can be seen at extremely low levels. | Accession_evidence | NDB | FN894534 | ||
FN894535 | ||||||
Curator_confirmed | WBPerson1983 | |||||
From_analysis | RNASeq | |||||
Properties | Transcript | ncRNA | ||||
Isoform | Curator_confirmed | WBPerson1983 | ||||
Method | non_coding_transcript |