WormBase Tree Display for Variation: WBVar02131168

WBVar02131168 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h11059
    Other_name: Y54G11A.11.1:c.171C>T
      CE22483:p.Phe57=
      Y54G11A.11.2:c.171C>T
    HGVSg: CHROMOSOME_II:g.14350396C>T
  Sequence_details: SMap: S_parent: Sequence: Y54G11A
    Flanking_sequences: ATGTCGGTTATATCTCGTGTCGTGTCTGCTCTGAAGACTT CAAACAAACATCAACTACCTCTCCGAGCCAATCGACGTCT
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 14350299 14350299
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023707
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00013219
    Transcript: Y54G11A.11.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54G11A.11.1:c.171C>T
        HGVSp: CE22483:p.Phe57=
        cDNA_position: 195
        CDS_position: 171
        Protein_position: 57
        Exon_number: 3/4
        Codon_change: ttC/ttT
        Amino_acid_change: F
      Y54G11A.11.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54G11A.11.2:c.171C>T
        HGVSp: CE22483:p.Phe57=
        cDNA_position: 302
        CDS_position: 171
        Protein_position: 57
        Exon_number: 4/5
        Codon_change: ttC/ttT
        Amino_acid_change: F
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose