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WormBase Tree Display for Variation: WBVar02127987

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Name Class

WBVar02127987EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh7131
Other_nameCE18170:p.Pro437=
T02E1.5a.1:c.267+1193C>T
T02E1.3b.1:c.1416G>A
T02E1.5b.1:c.273+1193C>T
CE18171:p.Pro472=
T02E1.3c.1:c.1311G>A
CE32481:p.Pro439=
T02E1.3a.1:c.1317G>A
HGVSgCHROMOSOME_I:g.8216822G>A
Sequence_detailsSMapS_parentSequenceT02E1
Flanking_sequencesAGGGACCTCAACATCCGTTTGCGGCTCTTCTCTCACCACCGAGATCTCGGAGTCCTTGCTCCCACCTGATGACTCGTTTT
Mapping_targetCHROMOSOME_I
Source_location200CHROMOSOME_I82168158216815
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023702
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00011376
WBGene00000967
TranscriptT02E1.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT02E1.5b.1:c.273+1193C>T
Intron_number1/6
T02E1.3c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT02E1.3c.1:c.1311G>A
HGVSpCE18170:p.Pro437=
cDNA_position1345
CDS_position1311
Protein_position437
Exon_number9/12
Codon_changeccG/ccA
Amino_acid_changeP
T02E1.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT02E1.5a.1:c.267+1193C>T
Intron_number2/7
T02E1.3b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT02E1.3b.1:c.1416G>A
HGVSpCE18171:p.Pro472=
cDNA_position1416
CDS_position1416
Protein_position472
Exon_number8/10
Codon_changeccG/ccA
Amino_acid_changeP
T02E1.3a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT02E1.3a.1:c.1317G>A
HGVSpCE32481:p.Pro439=
cDNA_position1345
CDS_position1317
Protein_position439
Exon_number9/12
Codon_changeccG/ccA
Amino_acid_changeP
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose