WormBase Tree Display for Variation: WBVar02121475
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WBVar02121475 | Name | Public_name | WBVar02121475 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00852398 | |||||||
Sequence_details | SMap | S_parent | Sequence | Y58A7A | ||||
Flanking_sequences | TGTAATATTTTTTCAAAGTATTCAACAATT | CTCGATAAAACTCATTTCTTAGACATTCAGTGCACTTGATTTTTGTTTCACTTGATGACTTGATGAGGAATAGTTCAAAGGATTTCTTTTTTCGATTACAAAATCCACAGAAGTCATCAGATGAGTAGCAAGTCACCAAATTATTTTCTTTCTTCACCATAGCAACTAAATCATCCCATTCCAATTTTCCTCCAACCACACTCAATTCTTCAGAGTTTGCCCAAGTTGCATTGTCATACTGATTAGGACATGTGGCGCGTTGTAGAGAAAGATCATTCCAGTCAACAGAAGTTGAAGGCCGGCCATAGAATTTTTCAGATGTTTTAATCCTGCTGAAAAGTCTTCATGTGGATCCATTGAACAGTTACCCGTACATACCTAATAAGTTGCTTATCTTCCGCTACGTCTCCCGAAATTTTAGTTATAACCTCTAAAACAGTTGGCGCGCTTGATACTATTTTTCTCAAATTCTCTCCATTCCTTCTGATTGGGTCAGCGCCAATTGTTGAATTGAAGATCATGCTAAAAACGATTTCATTTGCTATGTCTGAAATTTAAGCACTCACTTGTATGTTTTGTGCTTCAAATGAGTAAGAACTATCACAGCAGTAGTCTCTCCGTCTTGCGTAGTTCCATTTGGTTGACATCGTTTTGAAATATCAATCAAGTACTGGTTCTTTTGAAGATCCTTGACACGGAGGTCACCTTCGAGGCGAAGTTGATTAATCTGATCCTCAAAAGGTTCAGTTAACTTAACAAAAGTAACATCAGCCTGAATGAATGTGTATCCTTCCTGATTTAAATATTCTTGAACATTGAACTGTTGACTGTACTCCGATCCAGTCTCTAGTTCATCATAATCAACCATATCATACGATAATTCACTGTCTTTCCGGTTTTTGGGATGGGCTTGTTTTGATTGAGTTCTCACCTTGAAGGCAGCAAGATCGAAAACACCCGTCGGACGATGTGAGTCCACAACTTCGTCTTCATCATCTTCAAACTCTTCATCCAAATCATCATAATTCTCCATATCAACCTTTTTATTTTGACGATGTCTCCTTGACTTTGACACGACTTTCGCTTTGAACATTTCCTTTCCAACAACATCTTGGCTTCTATGAGTTTTATAGATATTGTAGGATACTGTTGGTTGCCTCTTGGAATCTTCATCGACTTCCTCACTTCGAAGTGTCATCACTTTTGCATTTGCCTTTTTACTAAACTCTCTAGTATTCGGGAGGAAATTTGAATAATCTTGTCCTCTCGCTGATGATGTTATGGCACTTCTGATTTCAAATTCTCCCTGTTTGTTTTCTTTGTTAAGAACTCTTGAGTGAACAGCGAATGTTGATTTCTCTGGGTAGATGAATCCGAATTGCGCCAATCCATTTTTCTCAACAACTTCTGCATTCACGTTTTCTGGAGCTCCGGCCAAAAGGAAAGTTGTCTTGGCATCTTGCCAACGATTTTTCTTGTTCAGAGAATAT | ||||||
Mapping_target | Y58A7A | |||||||
Source_location | 225 | CHROMOSOME_V | 5066001 | 5079000 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Tandem_duplication | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021977 | ||||||
WBGene00021976 | ||||||||
WBGene00021975 | ||||||||
WBGene00198104 | ||||||||
WBGene00198478 | ||||||||
Transcript | Y58A7A.10 | |||||||
Y58A7A.3.1 | ||||||||
Y58A7A.1b.1 | ||||||||
Y58A7A.11 | ||||||||
Y58A7A.1a.1 | ||||||||
Y58A7A.2.1 | ||||||||
Y58A7A.3.2 | ||||||||
Remark | The boundaries of this variant have been identified only approximately | |||||||
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous | ||||||||
Method | WGS_Flibotte |