WormBase Tree Display for Gene: WBGene00021976
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| WBGene00021976 | SMap | S_parent | Sequence | Y58A7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y58A7A.2 | |||||||
| Molecular_name | Y58A7A.2 | ||||||||
| Y58A7A.2.1 | |||||||||
| CE53408 | |||||||||
| Other_name | Y58A7A.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y58A7A.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y58A7A.2 | ||||||||
| DB_info | Database | AceView | gene | 5F548 | |||||
| WormQTL | gene | WBGene00021976 | |||||||
| WormFlux | gene | WBGene00021976 | |||||||
| NDB | locus_tag | CELE_Y58A7A.2 | |||||||
| NCBI | gene | 190382 | |||||||
| RefSeq | protein | NM_071958.2 | |||||||
| TrEMBL | UniProtAcc | Q966A7 | |||||||
| UniProt_GCRP | UniProtAcc | Q966A7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00030418 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WormBase-Compara | |||||||||
| WBGene00219516 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g14155 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; anterior hypodermis; arc ant V; and excretory system based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on RNA-seq and microarray studies. Is affected by twelve chemicals including methylmercury hydroxide; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y58A7A.2 | |||||||
| Corresponding_CDS_history | Y58A7A.2:wp271 | ||||||||
| Corresponding_transcript | Y58A7A.2.1 | ||||||||
| Other_sequence | CJC12749_1 | ||||||||
| CBC07274_1 | |||||||||
| Associated_feature | WBsf652605 | ||||||||
| WBsf233643 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057725 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1013424 | ||||||||
| Expr1161153 | |||||||||
| Expr2008087 | |||||||||
| Expr2026325 | |||||||||
| Drives_construct | WBCnstr00024380 | ||||||||
| Construct_product | WBCnstr00024380 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (143) | |||||||||
| Map_info | Positive | Positive_clone | Y58A7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -2.93634 | |||||||
| Method | Gene |
