WormBase Tree Display for Variation: WBVar02115727
expand all nodes | collapse all nodes | view schema
WBVar02115727 | Name | Public_name | WBVar02115727 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00846463 | |||||||
Y40H4A.1a.2:c.810+368_810+375delinsTTTATTTT | ||||||||
Y40H4A.1a.1:c.810+368_810+375delinsTTTATTTT | ||||||||
Y40H4A.1a.3:c.810+368_810+375delinsTTTATTTT | ||||||||
Y40H4A.1b.1:c.888+242_888+249delinsTTTATTTT | ||||||||
HGVSg | CHROMOSOME_V:g.14567609_14567616delinsAAAATAAA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y40H4A | ||||
Flanking_sequences | TAACTATTTTGAAAAAATAATATTTCCGAC | AAGTTTTCAAACCTTTGCTATTTAAATTAT | ||||||
Mapping_target | Y40H4A | |||||||
Source_location | 225 | CHROMOSOME_V | 14567594 | 14567601 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | AAAATAAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001519 | ||||||
Transcript | Y40H4A.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y40H4A.1a.1:c.810+368_810+375delinsTTTATTTT | |||||||
Intron_number | 7/12 | |||||||
Y40H4A.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y40H4A.1b.1:c.888+242_888+249delinsTTTATTTT | |||||||
Intron_number | 5/10 | |||||||
Y40H4A.1a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y40H4A.1a.3:c.810+368_810+375delinsTTTATTTT | |||||||
Intron_number | 6/11 | |||||||
Y40H4A.1a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y40H4A.1a.2:c.810+368_810+375delinsTTTATTTT | |||||||
Intron_number | 5/10 | |||||||
Method | WGS_Flibotte |