WormBase Tree Display for Variation: WBVar02115679
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WBVar02115679 | Name | Public_name | WBVar02115679 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00846413 | |||||||
T01D3.3a.1:c.221-1259_221-1251delinsTAAATTTT | ||||||||
T01D3.3b.1:c.380-545_380-537delinsTAAATTTT | ||||||||
T01D3.3c.1:c.224-1259_224-1251delinsTAAATTTT | ||||||||
T01D3.2.1:c.274-17_274-9delinsAAAATTTA | ||||||||
HGVSg | CHROMOSOME_V:g.13706997_13707005delinsTAAATTTT | |||||||
Sequence_details | SMap | S_parent | Sequence | T01D3 | ||||
Flanking_sequences | TCACAAAGAATCCATCTAGTAGCTGAAATT | AAAAAAACGGTAAAAAACCATCCTTACATC | ||||||
Mapping_target | T01D3 | |||||||
Source_location | 225 | CHROMOSOME_V | 13706984 | 13706992 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TAAATTTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00011328 | ||||||
WBGene00011327 | ||||||||
Transcript | T01D3.3c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.3c.1:c.224-1259_224-1251delinsTAAATTTT | |||||||
Intron_number | 3/9 | |||||||
T01D3.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.3b.1:c.380-545_380-537delinsTAAATTTT | |||||||
Intron_number | 4/13 | |||||||
T01D3.2.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.2.1:c.274-17_274-9delinsAAAATTTA | |||||||
Intron_number | 3/5 | |||||||
T01D3.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.3a.1:c.221-1259_221-1251delinsTAAATTTT | |||||||
Intron_number | 2/8 | |||||||
Method | WGS_Flibotte |