WormBase Tree Display for Variation: WBVar02104696
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| WBVar02104696 | Name | Public_name | WBVar02104696 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00835047 | |||||||
| Y50E8A.9a.1:c.855_868delinsATTTGGAAATTTAA | ||||||||
| CE22316:p.Ser286_Pro290delinsPheGlyAsnLeuThr | ||||||||
| Y50E8A.9c.1:c.*741_*754delinsATTTGGAAATTTAA | ||||||||
| HGVSg | CHROMOSOME_V:g.14778424_14778437delinsTTAAATTTCCAAAT | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y50E8A | ||||
| Flanking_sequences | ACTAATACCCAAAAAATCAATAGAATCCAG | GAGAATCCACTATGGTAAGAACGTTGTCTA | ||||||
| Mapping_target | Y50E8A | |||||||
| Source_location | 225 | CHROMOSOME_V | 14778409 | 14778422 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | TTAAATTTCCAAAT | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00013052 | ||||||
| Transcript | Y50E8A.9a.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | |||||||
| HGVSc | Y50E8A.9a.1:c.855_868delinsATTTGGAAATTTAA | |||||||
| HGVSp | CE22316:p.Ser286_Pro290delinsPheGlyAsnLeuThr | |||||||
| cDNA_position | 882-896 | |||||||
| CDS_position | 855-869 | |||||||
| Protein_position | 285-290 | |||||||
| Exon_number | 5/6 | |||||||
| Codon_change | tcTTCTGGATATTTCCCt/tcATTTGGAAATTTAACt | |||||||
| Amino_acid_change | SSGYFP/SFGNLT | |||||||
| Y50E8A.9c.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y50E8A.9c.1:c.*741_*754delinsATTTGGAAATTTAA | |||||||
| cDNA_position | 1071-1085 | |||||||
| Exon_number | 7/7 | |||||||
| Method | WGS_Flibotte |
