WormBase Tree Display for Variation: WBVar02077669
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WBVar02077669 | Name | Public_name | WBVar02077669 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00806982 | |||||||
HGVSg | CHROMOSOME_II:g.1607131_1609901delinsCTTTCTCA | |||||||
Sequence_details | SMap | S_parent | Sequence | C08E3 | ||||
Flanking_sequences | TTGATGTCAAGTTCTTCGCCGATCTAAGAG | ATACCGGCTATGAACTTTTTGCGGGATTTT | ||||||
Mapping_target | C08E3 | |||||||
Source_location | 225 | CHROMOSOME_II | 1607138 | 1609908 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CTTTCTCA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015598 | ||||||
WBGene00015596 | ||||||||
WBGene00015597 | ||||||||
Transcript | C08E3.6.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||||
VEP_impact | HIGH | |||||||
cDNA_position | 654-? | |||||||
CDS_position | 639-? | |||||||
Protein_position | 213-? | |||||||
Intron_number | 4/5 | |||||||
Exon_number | 4-6/6 | |||||||
Pseudogene | C08E3.5 | VEP_consequence | transcript_ablation | |||||
VEP_impact | HIGH | |||||||
Intron_number | 1-2/2 | |||||||
Exon_number | 1-3/3 | |||||||
C08E3.4 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
cDNA_position | ?-473 | |||||||
Exon_number | 1/2 | |||||||
Method | WGS_Flibotte |