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WormBase Tree Display for Variation: WBVar02077669

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Name Class

WBVar02077669NamePublic_nameWBVar02077669
Other_namecewivar00806982
HGVSgCHROMOSOME_II:g.1607131_1609901delinsCTTTCTCA
Sequence_detailsSMapS_parentSequenceC08E3
Flanking_sequencesTTGATGTCAAGTTCTTCGCCGATCTAAGAGATACCGGCTATGAACTTTTTGCGGGATTTT
Mapping_targetC08E3
Source_location225CHROMOSOME_II16071381609908From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionCTTTCTCA
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00015598
WBGene00015596
WBGene00015597
TranscriptC08E3.6.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
VEP_impactHIGH
cDNA_position654-?
CDS_position639-?
Protein_position213-?
Intron_number4/5
Exon_number4-6/6
PseudogeneC08E3.5VEP_consequencetranscript_ablation
VEP_impactHIGH
Intron_number1-2/2
Exon_number1-3/3
C08E3.4VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
cDNA_position?-473
Exon_number1/2
MethodWGS_Flibotte