WormBase Tree Display for Variation: WBVar02073845
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WBVar02073845 | Name | Public_name | WBVar02073845 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00803154 | |||||||
F29C12.3c.1:c.50+805_50+807del | ||||||||
F29C12.1a.1:c.1264_1266del | ||||||||
F29C12.1b.1:c.1258_1260del | ||||||||
CE19820:p.Gln424del | ||||||||
F29C12.3b.1:c.2486+805_2486+807del | ||||||||
F29C12.3a.1:c.2480+805_2480+807del | ||||||||
CE37902:p.Gln422del | ||||||||
HGVSg | CHROMOSOME_II:g.13109380_13109382del | |||||||
Sequence_details | SMap | S_parent | Sequence | F29C12 | ||||
Flanking_sequences | CAACTCCCAGTTGCTCCACAACAACAGGTA | CAGCAACGTCCACAGCAGCCACTACCACAG | ||||||
Mapping_target | F29C12 | |||||||
Source_location | 225 | CHROMOSOME_II | 13109310 | 13109312 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004120 | ||||||
WBGene00009245 | ||||||||
Transcript | F29C12.3b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F29C12.3b.1:c.2486+805_2486+807del | |||||||
Intron_number | 11/17 | |||||||
F29C12.1a.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F29C12.1a.1:c.1264_1266del | |||||||
HGVSp | CE19820:p.Gln424del | |||||||
cDNA_position | 1268-1270 | |||||||
CDS_position | 1264-1266 | |||||||
Protein_position | 422 | |||||||
Exon_number | 4/7 | |||||||
Codon_change | CAG/- | |||||||
Amino_acid_change | Q/- | |||||||
F29C12.1b.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F29C12.1b.1:c.1258_1260del | |||||||
HGVSp | CE37902:p.Gln422del | |||||||
cDNA_position | 1262-1264 | |||||||
CDS_position | 1258-1260 | |||||||
Protein_position | 420 | |||||||
Exon_number | 4/7 | |||||||
Codon_change | CAG/- | |||||||
Amino_acid_change | Q/- | |||||||
F29C12.3c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F29C12.3c.1:c.50+805_50+807del | |||||||
Intron_number | 1/6 | |||||||
F29C12.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F29C12.3a.1:c.2480+805_2480+807del | |||||||
Intron_number | 11/17 | |||||||
Method | WGS_Flibotte |