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WormBase Tree Display for Variation: WBVar02073845

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Name Class

WBVar02073845NamePublic_nameWBVar02073845
Other_namecewivar00803154
F29C12.3c.1:c.50+805_50+807del
F29C12.1a.1:c.1264_1266del
F29C12.1b.1:c.1258_1260del
CE19820:p.Gln424del
F29C12.3b.1:c.2486+805_2486+807del
F29C12.3a.1:c.2480+805_2480+807del
CE37902:p.Gln422del
HGVSgCHROMOSOME_II:g.13109380_13109382del
Sequence_detailsSMapS_parentSequenceF29C12
Flanking_sequencesCAACTCCCAGTTGCTCCACAACAACAGGTACAGCAACGTCCACAGCAGCCACTACCACAG
Mapping_targetF29C12
Source_location225CHROMOSOME_II1310931013109312From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004120
WBGene00009245
TranscriptF29C12.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C12.3b.1:c.2486+805_2486+807del
Intron_number11/17
F29C12.1a.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScF29C12.1a.1:c.1264_1266del
HGVSpCE19820:p.Gln424del
cDNA_position1268-1270
CDS_position1264-1266
Protein_position422
Exon_number4/7
Codon_changeCAG/-
Amino_acid_changeQ/-
F29C12.1b.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScF29C12.1b.1:c.1258_1260del
HGVSpCE37902:p.Gln422del
cDNA_position1262-1264
CDS_position1258-1260
Protein_position420
Exon_number4/7
Codon_changeCAG/-
Amino_acid_changeQ/-
F29C12.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C12.3c.1:c.50+805_50+807del
Intron_number1/6
F29C12.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C12.3a.1:c.2480+805_2480+807del
Intron_number11/17
MethodWGS_Flibotte