WormBase Tree Display for Variation: WBVar01872642
expand all nodes | collapse all nodes | view schema
WBVar01872642 | Name | Public_name | WBVar01872642 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00586917 | |||||||
Y40H4A.1a.3:c.-20+1583T>C | ||||||||
Y40H4A.1a.1:c.-20+1583T>C | ||||||||
HGVSg | CHROMOSOME_V:g.14577430A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y40H4A | ||||
Flanking_sequences | GTTTTATCTAGAAAAAATTACAGAGCTTCT | AAACGAAACGAATATGAAACGCGTGATAGT | ||||||
Mapping_target | Y40H4A | |||||||
Source_location | 225 | CHROMOSOME_V | 14577415 | 14577415 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001519 | ||||||
Transcript | Y40H4A.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y40H4A.1a.1:c.-20+1583T>C | |||||||
Intron_number | 2/12 | |||||||
Y40H4A.1a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y40H4A.1a.3:c.-20+1583T>C | |||||||
Intron_number | 1/11 | |||||||
Method | WGS_Flibotte |