WormBase Tree Display for Variation: WBVar01872452
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WBVar01872452 | Name | Public_name | WBVar01872452 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00586726 | |||||||
CE35800:p.Asp145= | ||||||||
Y40H4A.1a.3:c.435T>C | ||||||||
Y40H4A.1a.2:c.435T>C | ||||||||
CE27783:p.Asp145= | ||||||||
Y40H4A.1a.1:c.435T>C | ||||||||
Y40H4A.1b.1:c.435T>C | ||||||||
HGVSg | CHROMOSOME_V:g.14568359A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y40H4A | ||||
Flanking_sequences | ATTCAGGACGGATGCGTTGCTCATTAAATA | TCGATGCATAACCAGAACTGGCACATTGTG | ||||||
Mapping_target | Y40H4A | |||||||
Source_location | 225 | CHROMOSOME_V | 14568344 | 14568344 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001519 | ||||||
Transcript | Y40H4A.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.1:c.435T>C | |||||||
HGVSp | CE27783:p.Asp145= | |||||||
cDNA_position | 580 | |||||||
CDS_position | 435 | |||||||
Protein_position | 145 | |||||||
Exon_number | 7/13 | |||||||
Codon_change | gaT/gaC | |||||||
Amino_acid_change | D | |||||||
Y40H4A.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1b.1:c.435T>C | |||||||
HGVSp | CE35800:p.Asp145= | |||||||
cDNA_position | 435 | |||||||
CDS_position | 435 | |||||||
Protein_position | 145 | |||||||
Exon_number | 4/11 | |||||||
Codon_change | gaT/gaC | |||||||
Amino_acid_change | D | |||||||
Y40H4A.1a.3 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.3:c.435T>C | |||||||
HGVSp | CE27783:p.Asp145= | |||||||
cDNA_position | 521 | |||||||
CDS_position | 435 | |||||||
Protein_position | 145 | |||||||
Exon_number | 6/12 | |||||||
Codon_change | gaT/gaC | |||||||
Amino_acid_change | D | |||||||
Y40H4A.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.2:c.435T>C | |||||||
HGVSp | CE27783:p.Asp145= | |||||||
cDNA_position | 454 | |||||||
CDS_position | 435 | |||||||
Protein_position | 145 | |||||||
Exon_number | 5/11 | |||||||
Codon_change | gaT/gaC | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |