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WormBase Tree Display for Variation: WBVar01872452

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Name Class

WBVar01872452NamePublic_nameWBVar01872452
Other_namecewivar00586726
CE35800:p.Asp145=
Y40H4A.1a.3:c.435T>C
Y40H4A.1a.2:c.435T>C
CE27783:p.Asp145=
Y40H4A.1a.1:c.435T>C
Y40H4A.1b.1:c.435T>C
HGVSgCHROMOSOME_V:g.14568359A>G
Sequence_detailsSMapS_parentSequenceY40H4A
Flanking_sequencesATTCAGGACGGATGCGTTGCTCATTAAATATCGATGCATAACCAGAACTGGCACATTGTG
Mapping_targetY40H4A
Source_location225CHROMOSOME_V1456834414568344From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001519
TranscriptY40H4A.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.1:c.435T>C
HGVSpCE27783:p.Asp145=
cDNA_position580
CDS_position435
Protein_position145
Exon_number7/13
Codon_changegaT/gaC
Amino_acid_changeD
Y40H4A.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1b.1:c.435T>C
HGVSpCE35800:p.Asp145=
cDNA_position435
CDS_position435
Protein_position145
Exon_number4/11
Codon_changegaT/gaC
Amino_acid_changeD
Y40H4A.1a.3VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.3:c.435T>C
HGVSpCE27783:p.Asp145=
cDNA_position521
CDS_position435
Protein_position145
Exon_number6/12
Codon_changegaT/gaC
Amino_acid_changeD
Y40H4A.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.2:c.435T>C
HGVSpCE27783:p.Asp145=
cDNA_position454
CDS_position435
Protein_position145
Exon_number5/11
Codon_changegaT/gaC
Amino_acid_changeD
MethodWGS_Flibotte