WormBase Tree Display for Variation: WBVar01872450
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WBVar01872450 | Name | Public_name | WBVar01872450 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00586724 | |||||||
Y40H4A.1a.3:c.459C>T | ||||||||
CE35800:p.Val153= | ||||||||
Y40H4A.1a.1:c.459C>T | ||||||||
Y40H4A.1a.2:c.459C>T | ||||||||
CE27783:p.Val153= | ||||||||
Y40H4A.1b.1:c.459C>T | ||||||||
HGVSg | CHROMOSOME_V:g.14568335G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y40H4A | ||||
Flanking_sequences | TCGATCGAAGGAAATGAGCAGAAGATTCAG | ACGGATGCGTTGCTCATTAAATAATCGATG | ||||||
Mapping_target | Y40H4A | |||||||
Source_location | 225 | CHROMOSOME_V | 14568320 | 14568320 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001519 | ||||||
Transcript | Y40H4A.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.1:c.459C>T | |||||||
HGVSp | CE27783:p.Val153= | |||||||
cDNA_position | 604 | |||||||
CDS_position | 459 | |||||||
Protein_position | 153 | |||||||
Exon_number | 7/13 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Y40H4A.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1b.1:c.459C>T | |||||||
HGVSp | CE35800:p.Val153= | |||||||
cDNA_position | 459 | |||||||
CDS_position | 459 | |||||||
Protein_position | 153 | |||||||
Exon_number | 4/11 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Y40H4A.1a.3 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.3:c.459C>T | |||||||
HGVSp | CE27783:p.Val153= | |||||||
cDNA_position | 545 | |||||||
CDS_position | 459 | |||||||
Protein_position | 153 | |||||||
Exon_number | 6/12 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Y40H4A.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.2:c.459C>T | |||||||
HGVSp | CE27783:p.Val153= | |||||||
cDNA_position | 478 | |||||||
CDS_position | 459 | |||||||
Protein_position | 153 | |||||||
Exon_number | 5/11 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |