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WormBase Tree Display for Variation: WBVar01872450

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Name Class

WBVar01872450NamePublic_nameWBVar01872450
Other_namecewivar00586724
Y40H4A.1a.3:c.459C>T
CE35800:p.Val153=
Y40H4A.1a.1:c.459C>T
Y40H4A.1a.2:c.459C>T
CE27783:p.Val153=
Y40H4A.1b.1:c.459C>T
HGVSgCHROMOSOME_V:g.14568335G>A
Sequence_detailsSMapS_parentSequenceY40H4A
Flanking_sequencesTCGATCGAAGGAAATGAGCAGAAGATTCAGACGGATGCGTTGCTCATTAAATAATCGATG
Mapping_targetY40H4A
Source_location225CHROMOSOME_V1456832014568320From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001519
TranscriptY40H4A.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.1:c.459C>T
HGVSpCE27783:p.Val153=
cDNA_position604
CDS_position459
Protein_position153
Exon_number7/13
Codon_changegtC/gtT
Amino_acid_changeV
Y40H4A.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1b.1:c.459C>T
HGVSpCE35800:p.Val153=
cDNA_position459
CDS_position459
Protein_position153
Exon_number4/11
Codon_changegtC/gtT
Amino_acid_changeV
Y40H4A.1a.3VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.3:c.459C>T
HGVSpCE27783:p.Val153=
cDNA_position545
CDS_position459
Protein_position153
Exon_number6/12
Codon_changegtC/gtT
Amino_acid_changeV
Y40H4A.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.2:c.459C>T
HGVSpCE27783:p.Val153=
cDNA_position478
CDS_position459
Protein_position153
Exon_number5/11
Codon_changegtC/gtT
Amino_acid_changeV
MethodWGS_Flibotte