WormBase Tree Display for Variation: WBVar01441312

WBVar01441312 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01441312
    Other_name: F29C12.3a.1:c.2480+21A>G
      F29C12.1a.1:c.*173T>C
      F29C12.1b.1:c.*173T>C
      F29C12.3c.1:c.50+21A>G
      F29C12.3b.1:c.2486+21A>G
    HGVSg: CHROMOSOME_II:g.13110166T>C
  Sequence_details: SMap: S_parent: Sequence: F29C12
    Flanking_sequences: CAGTGTGCCATCACAATAAATGATTTTAAA ATTAAGAGAAAGAAGCTTACATGTGCAAAA
    Mapping_target: F29C12
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (24)
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193328905
        dbSNP_ss ss 295504824
    Status: Live
  Affects: Gene: WBGene00004120
      WBGene00009245
    Transcript: F29C12.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F29C12.3b.1:c.2486+21A>G
        Intron_number: 11/17
      F29C12.1a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F29C12.1a.1:c.*173T>C
        cDNA_position: 1956
        Exon_number: 7/7
      F29C12.1b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F29C12.1b.1:c.*173T>C
        cDNA_position: 1950
        Exon_number: 7/7
      F29C12.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F29C12.3c.1:c.50+21A>G
        Intron_number: 1/6
      F29C12.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F29C12.3a.1:c.2480+21A>G
        Intron_number: 11/17
  Reference: WBPaper00040707
  Method: WGS_Andersen