WormBase Tree Display for Variation: WBVar01435004
expand all nodes | collapse all nodes | view schema
WBVar01435004 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01435004 | ||||
Other_name | Y105E8B.1i.1:c.499+33A>G | |||||
Y105E8B.1f.1:c.*159+33A>G | ||||||
Y105E8B.1c.1:c.688+33A>G | ||||||
Y105E8B.1p.1:c.772+33A>G | ||||||
Y105E8B.1m.1:c.499+33A>G | ||||||
Y105E8B.1n.1:c.385+33A>G | ||||||
Y105E8B.1b.1:c.499+33A>G | ||||||
Y105E8B.1l.1:c.688+33A>G | ||||||
Y105E8B.1o.1:c.772+33A>G | ||||||
Y105E8B.1t.1:c.688+33A>G | ||||||
Y105E8B.1d.1:c.772+33A>G | ||||||
Y105E8B.1a.1:c.772+33A>G | ||||||
Y105E8B.1s.1:c.772+33A>G | ||||||
Y105E8B.1e.1:c.688+33A>G | ||||||
Y105E8B.1j.1:c.385+33A>G | ||||||
Y105E8B.1r.1:c.772+33A>G | ||||||
Y105E8B.1q.1:c.772+33A>G | ||||||
Y105E8B.1k.1:c.688+33A>G | ||||||
Y105E8B.1g.1:c.772+33A>G | ||||||
Y105E8B.1e.2:c.688+33A>G | ||||||
HGVSg | CHROMOSOME_I:g.14622795T>C | |||||
Sequence_details | SMap | S_parent | Sequence | Y105E8B | ||
Flanking_sequences | ATATAGACTTACACAAATTGACAATGACAT | TAGATATCACATATAAAGCCCCTTAGACCT | ||||
Mapping_target | Y105E8B | |||||
Type_of_mutation | Substitution | t | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193323066 | ||
dbSNP_ss | ss | 295498984 | ||||
Status | Live | |||||
Affects | Gene | WBGene00002978 | ||||
Transcript | Y105E8B.1l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1l.1:c.688+33A>G | |||||
Intron_number | 7/8 | |||||
Y105E8B.1k.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1k.1:c.688+33A>G | |||||
Intron_number | 6/7 | |||||
Y105E8B.1s.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1s.1:c.772+33A>G | |||||
Intron_number | 8/8 | |||||
Y105E8B.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1b.1:c.499+33A>G | |||||
Intron_number | 6/8 | |||||
Y105E8B.1n.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1n.1:c.385+33A>G | |||||
Intron_number | 4/4 | |||||
Y105E8B.1o.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1o.1:c.772+33A>G | |||||
Intron_number | 9/10 | |||||
Y105E8B.1q.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1q.1:c.772+33A>G | |||||
Intron_number | 8/8 | |||||
Y105E8B.1p.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1p.1:c.772+33A>G | |||||
Intron_number | 8/8 | |||||
Y105E8B.1m.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1m.1:c.499+33A>G | |||||
Intron_number | 5/5 | |||||
Y105E8B.1e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1e.1:c.688+33A>G | |||||
Intron_number | 7/9 | |||||
Y105E8B.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1a.1:c.772+33A>G | |||||
Intron_number | 9/10 | |||||
Y105E8B.1e.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1e.2:c.688+33A>G | |||||
Intron_number | 7/8 | |||||
Y105E8B.1i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1i.1:c.499+33A>G | |||||
Intron_number | 5/5 | |||||
Y105E8B.1c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1c.1:c.688+33A>G | |||||
Intron_number | 7/9 | |||||
Y105E8B.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1d.1:c.772+33A>G | |||||
Intron_number | 9/11 | |||||
Y105E8B.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1g.1:c.772+33A>G | |||||
Intron_number | 9/9 | |||||
Y105E8B.1t.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1t.1:c.688+33A>G | |||||
Intron_number | 7/9 | |||||
Y105E8B.1r.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1r.1:c.772+33A>G | |||||
Intron_number | 8/8 | |||||
Y105E8B.1j.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1j.1:c.385+33A>G | |||||
Intron_number | 4/4 | |||||
Y105E8B.1f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y105E8B.1f.1:c.*159+33A>G | |||||
Intron_number | 10/10 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |