WormBase Tree Display for Variation: WBVar01322762

WBVar01322762 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01322762
    Other_name: cewivar00397397
      CE39403:p.Lys143Glu
      CE51680:p.Lys114Glu
      T12B5.6b.1:c.427A>G
      T12B5.6c.1:c.340A>G
    HGVSg: CHROMOSOME_III:g.934153T>C
  Sequence_details: SMap: S_parent: Sequence: T12B5
    Flanking_sequences: ACTAAGTTCTATTTGCTGCACGTGAATACATTTTTCGGCTTTGAAAATCT AATGAAAGTTGTAACAATGTCGCATCTGTTTTCCGTAAAGTTCCGAATTG
    Mapping_target: T12B5
    Type_of_mutation: Substitution: t C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539178766
    Status: Live
  Affects: Gene: WBGene00020453
    Transcript: T12B5.6c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.75 tolerated
        PolyPhen: 0 benign
        HGVSc: T12B5.6c.1:c.340A>G
        HGVSp: CE51680:p.Lys114Glu
        cDNA_position: 358
        CDS_position: 340
        Protein_position: 114
        Exon_number: 3/5
        Codon_change: Aag/Gag
        Amino_acid_change: K/E
      T12B5.6b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.68 tolerated
        PolyPhen: 0 benign
        HGVSc: T12B5.6b.1:c.427A>G
        HGVSp: CE39403:p.Lys143Glu
        cDNA_position: 447
        CDS_position: 427
        Protein_position: 143
        Exon_number: 3/5
        Codon_change: Aag/Gag
        Amino_acid_change: K/E
  Reference: WBPaper00037807
  Method: WGS_De_Bono