WormBase Tree Display for Variation: WBVar00313081

WBVar00313081 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn16260
    Other_name: OH9305_70384
      CE51760:p.Leu2386Phe
      F25F2.2.1:c.7158G>T
    HGVSg: CHROMOSOME_III:g.4530509G>T
  Sequence_details: SMap: S_parent: Sequence: F25F2
    Flanking_sequences: TTACTGATGGAATGTTCACTGCTTATGCAAAAACTTGTCGTTGAGATCTT AGGAAGCGGTTCGATGCAGCCTCCTCCAAGATTCGAGCAAAGTCATTATG
    Mapping_target: F25F2
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029567
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00000396
    Transcript: F25F2.2.1 VEP_consequence: missense_variant,splice_region_variant
        VEP_impact: MODERATE
        SIFT: 0.12 tolerated
        PolyPhen: 0.979 probably_damaging
        HGVSc: F25F2.2.1:c.7158G>T
        HGVSp: CE51760:p.Leu2386Phe
        cDNA_position: 7260
        CDS_position: 7158
        Protein_position: 2386
        Exon_number: 15/23
        Codon_change: ttG/ttT
        Amino_acid_change: L/F
  Genetics: Map: III
  Reference: WBPaper00036201
  Method: WGS_Hobert