WormBase Tree Display for Variation: WBVar00250229

WBVar00250229 Name: Public_name: tm1221
    HGVSg: CHROMOSOME_V:g.9089754_9090742delinsC
  Sequence_details: SMap: S_parent: Sequence: T27E4
    Flanking_sequences: gttatgttgttttgaaatatttgaattggaaagtcggatttgatgtttttgttatgctagagaacatgaataaattaaattaatgactttattgaaattaagaatatttggaatacaataaaagattaatgttttgcaacaaaattaatgggaatagaacgagatgagttagtcttctttggagcctcaatttgaagttttccttcattcgaaattgcagatttgacagaagttaaatcaacatcttctggtagaagaatcatttttgaaaatgatcgtttcgagtatccatgctctgattttttttcttgaattccttcaatttttagttctcttccatccaattcaattttaagatcttctggtttgaaatgagaaacatcgagttgaacagagaatttagattcgtcatttacaatctgaaaaataaaacatttgacaaataaacaattgaaaaagagattattttcttacctctccaatattgtcggaaaaattgaatgagttgtgatcagcatttctccaatatggaaattgaacagatccagtgatttcatccaagaaatgatcgagaacatttgaatcagaaaatggagaac tgtacttcttgcataatgcctatttttgggtattgcacagcccctcccatcctaacacattctgcattgctccgcggaacccgccagatgtcatgctatacaacacccttaccctctcttaccgccacttcttaaacttacctggctgggggttatctcgcgatcatgaaggcgggatccccatggtgaggcctatccattgcacttttggatgggctgacctgtgtggcagtctcgagttgagattcgccaacagcttaatttttgcgtatcggggctgcgtgcgcgcggccct
    Mapping_target: T27E4
    Source_location: 7 CHROMOSOME_V 9089753 9090743 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: C
      Deletion
    PCR_product: tm1221_external
      tm1221_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1221
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00002017
      WBGene00002020
    Transcript: T27E4.9.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-13
        CDS_position: ?-13
        Protein_position: ?-5
        Exon_number: 1/2
      T27E4.2.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2/2
        Exon_number: 1-3/3
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 26615/26616-C-27604/27605 (989 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele