WormBase Tree Display for Variation: WBVar00230432
expand all nodes | collapse all nodes | view schema
| WBVar00230432 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00230432 | |||
| Other_name | pas42208 | ||||
| cewivar00015168 | |||||
| Y38E10A.11.1:c.-948T>A | |||||
| HGVSg | CHROMOSOME_II:g.12612718T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y38E10A | |
| Flanking_sequences | atttttgacaataggaattgttataaaacattccaatgaatgtcacaagttgctgtccagagaagaattctaagaaaaccttgtaattgaacttttttgaaacctctaagttgagtgttctgaaacacatttgtcagttttccaattcaagttttaattttttttgcagaaatattattgttccttgacgattttcttcgattctgcggagttttgaattctgtgagtacaacttttaattaagccaggccagtcggtggaggtcgagccataaaatcagacaatatcggtatgttatag | aagacaggtgacatcattttctcagagaacggtcattagagtatttgaacattttccaaaatgacgtgattgctgacgtgtttctagtggtctataattttcgttcaataatgaacatgattacaatttccatcgttcggtatcatctttctgatcagactgcctacgtgccaagttgcagtaaaattttcttggagaagaaactagctagcaaaaaattataaacctacagcgaggctctactgtgttctgtcaaaaaatgaatcaggaccagtcacggggttctggccttcctcattg | |||
| Mapping_target | Y38E10A | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (142) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01440916 | |||
| WBVar01440915 | |||||
| WBVar01248245 | |||||
| WBVar01314841 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012589 | |||
| Transcript | Y38E10A.11.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y38E10A.11.1:c.-948T>A | ||||
| cDNA_position | 201 | ||||
| Exon_number | 1/4 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
