WormBase Tree Display for Variation: WBVar00144108
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WBVar00144108 | Evidence | Paper_evidence | WBPaper00002034 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1559 | |||||
Other_name | ZK287.8a.1:c.266G>A | ||||||
ZK287.8b.1:c.-68G>A | |||||||
CE06617:p.Cys89Tyr | |||||||
HGVSg | CHROMOSOME_V:g.9700781G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | ZK287 | |||
Flanking_sequences | tctcatattgtctttattcagactccgtgt | ctgctccgtgtttggcaacgaccaaaacga | |||||
Mapping_target | ZK287 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00002034 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00001842 | |||||
Transcript | ZK287.8b.1 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | ZK287.8b.1:c.-68G>A | ||||||
cDNA_position | 12 | ||||||
Exon_number | 1/4 | ||||||
ZK287.8a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious_low_confidence | |||||
PolyPhen | 0.997 | probably_damaging | |||||
HGVSc | ZK287.8a.1:c.266G>A | ||||||
HGVSp | CE06617:p.Cys89Tyr | ||||||
cDNA_position | 380 | ||||||
CDS_position | 266 | ||||||
Protein_position | 89 | ||||||
Exon_number | 4/6 | ||||||
Codon_change | tGc/tAc | ||||||
Amino_acid_change | C/Y | ||||||
Genetics | Interpolated_map_position | V | 2.07715 | ||||
Reference | WBPaper00002034 | ||||||
Method | Substitution_allele |