WormBase Tree Display for Variation: WBVar00092985

WBVar00092985 Name: Public_name: ok1786
    HGVSg: CHROMOSOME_III:g.9629119_9630387del
  Sequence_details: SMap: S_parent: Sequence: F58A4
    Flanking_sequences: ggcttgagcaagctgatttccgcactgtcc gagtaagaaaaagaagatcaaagtggatag
    Mapping_target: F58A4
    Type_of_mutation: Deletion
    PCR_product: ok1786_external
      ok1786_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036516
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006704
      WBGene00006540
      WBGene00010230
    Transcript: F58A4.10.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 587-?
        Exon_number: 7/7
      F58A4.8.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-36
        CDS_position: ?-36
        Protein_position: ?-12
        Exon_number: 1/7
      F58A4.9.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-3/4
        Exon_number: 1-5/5
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele