WormBase Tree Display for Gene: WBGene00006704
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| WBGene00006704 | SMap | S_parent | Sequence | F58A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ubc-7 | Person_evidence | WBPerson89 | |||||
| Sequence_name | F58A4.10 | ||||||||
| Molecular_name | F58A4.10 | ||||||||
| F58A4.10.1 | |||||||||
| CE00216 | |||||||||
| Other_name | CELE_F58A4.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ubc-7 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubc | ||||||||
| Allele (16) | |||||||||
| Strain | WBStrain00037854 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042601 | ||||||||
| 00042602 | |||||||||
| 00042603 | |||||||||
| 00042604 | |||||||||
| 00042605 | |||||||||
| 00042606 | |||||||||
| 00042607 | |||||||||
| 00042608 | |||||||||
| Contained_in_operon | CEOP3608 | ||||||||
| Ortholog (29) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | ubc-7 encodes an E2 ubiquitin-conjugating enzyme; by homology, UBC-7 is predicted to function in the covalent attachment of ubiquitin molecules to protein substrates via its association with an E3 ubiquitin-protein ligase; loss of ubc-7 activity via large-scale RNAi screens results in no obvious abnormalities. | Paper_evidence | WBPaper00005337 | |||||
| WBPaper00027315 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 30 Jan 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Is an ortholog of human UBE2G1 (ubiquitin conjugating enzyme E2 G1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58A4.10 | |||||||
| Corresponding_transcript | F58A4.10.1 | ||||||||
| Other_sequence (128) | |||||||||
| Associated_feature | WBsf655473 | ||||||||
| WBsf976291 | |||||||||
| WBsf976292 | |||||||||
| WBsf976293 | |||||||||
| WBsf976294 | |||||||||
| WBsf981547 | |||||||||
| WBsf227337 | |||||||||
| WBsf227338 | |||||||||
| WBsf227339 | |||||||||
| Experimental_info | RNAi_result (33) | ||||||||
| Expr_pattern | Expr1024717 | ||||||||
| Expr1032787 | |||||||||
| Expr1152664 | |||||||||
| Expr2017715 | |||||||||
| Expr2035853 | |||||||||
| Drives_construct | WBCnstr00034202 | ||||||||
| Construct_product | WBCnstr00016310 | ||||||||
| WBCnstr00034202 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | III | Position | 0.825444 | Error | 0.007281 | |||
| Positive | Positive_clone | F58A4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
