WormBase Tree Display for Gene: WBGene00010230
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| WBGene00010230 | SMap | S_parent | Sequence | F58A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpac-19 | Person_evidence | WBPerson10054 | |||||
| Sequence_name | F58A4.9 | ||||||||
| Molecular_name | F58A4.9 | ||||||||
| F58A4.9.1 | |||||||||
| CE00225 | |||||||||
| Other_name | CELE_F58A4.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rpac-19 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Sep 2012 14:29:00 | WBPerson2970 | Name_change | CGC_name | rpac-19 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpac | ||||||||
| Allele | WBVar01500260 | ||||||||
| WBVar00405717 | |||||||||
| WBVar01499774 | |||||||||
| WBVar01723199 | |||||||||
| WBVar01332159 | |||||||||
| WBVar00092985 | |||||||||
| WBVar00851574 | |||||||||
| WBVar00851575 | |||||||||
| WBVar01645909 | |||||||||
| Strain | WBStrain00036516 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP3608 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00012187 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable protein dimerization activity. Predicted to contribute to RNA polymerase I activity and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I and transcription by RNA polymerase III. Predicted to be located in nucleus. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Used to study obesity. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 2. Is an ortholog of human POLR1D (RNA polymerase I and III subunit D). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:9970 | Homo sapiens | Paper_evidence | WBPaper00061889 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 28 Jun 2022 00:00:00 | ||||||||
| Potential_model | DOID:0080790 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20422) | |||||
| Models_disease_in_annotation | WBDOannot00001261 | ||||||||
| Molecular_info | Corresponding_CDS | F58A4.9 | |||||||
| Corresponding_transcript | F58A4.9.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf651391 | ||||||||
| WBsf993736 | |||||||||
| Experimental_info | RNAi_result (26) | ||||||||
| Expr_pattern | Expr1014907 | ||||||||
| Expr1034461 | |||||||||
| Expr1152674 | |||||||||
| Expr2015417 | |||||||||
| Expr2033652 | |||||||||
| Drives_construct | WBCnstr00031569 | ||||||||
| Construct_product | WBCnstr00031569 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (186) | |||||||||
| Map_info | Map | III | Position | 0.819375 | |||||
| Positive | Positive_clone | F58A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061889 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
