WormBase Tree Display for Variation: WBVar00091765

WBVar00091765 Name: Public_name: ok477
    Other_name: F49E8.3a.3:c.-1-390_458delinsGGGCCAATTTACAAGGCAA
      F49E8.3b.1:c.192-390_650delinsGGGCCAATTTACAAGGCAA
      F49E8.3a.2:c.-1-390_458delinsGGGCCAATTTACAAGGCAA
    HGVSg: CHROMOSOME_IV:g.7546550_7547507delinsTTGCCTTGTAAATTGGCCC
  Sequence_details: SMap: S_parent: Sequence: F49E8
    Flanking_sequences: tcgaaagttgccttgtaaattggctcatcg agtccacagggagacgcaggttcgctgagc
    Mapping_target: F49E8
    Type_of_mutation: Insertion: TTGCCTTGTAAATTGGCCC
      Deletion
    PCR_product: OK477_external
      OK477_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031440
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003914
      WBGene00000392
    Transcript: F49E8.3a.3 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F49E8.3a.3:c.-1-390_458delinsGGGCCAATTTACAAGGCAA
        cDNA_position: ?-606
        CDS_position: ?-458
        Protein_position: ?-153
        Intron_number: 1-3/8
        Exon_number: 2-4/9
      F49E8.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 291-?
        CDS_position: 291-?
        Protein_position: 97-?
        Intron_number: 2/3
        Exon_number: 2-4/4
      F49E8.3a.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F49E8.3a.2:c.-1-390_458delinsGGGCCAATTTACAAGGCAA
        cDNA_position: ?-658
        CDS_position: ?-458
        Protein_position: ?-153
        Intron_number: 2-4/9
        Exon_number: 3-5/10
      F49E8.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-459
        CDS_position: ?-458
        Protein_position: ?-153
        Intron_number: 2/7
        Exon_number: 1-3/8
      F49E8.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F49E8.3b.1:c.192-390_650delinsGGGCCAATTTACAAGGCAA
        cDNA_position: ?-650
        CDS_position: ?-650
        Protein_position: ?-217
        Intron_number: 2-3/7
        Exon_number: 3-4/8
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 4190
        4563
  Reference: WBPaper00065732
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele