WormBase Tree Display for Variation: WBVar00088157
expand all nodes | collapse all nodes | view schema
| WBVar00088157 | Evidence | Paper_evidence | WBPaper00005543 | ||
|---|---|---|---|---|---|
| Name | Public_name | ju82 | |||
| Other_name | CE33391:p.Glu71Ter | ||||
| F35D2.5a.1:c.211C>T | |||||
| HGVSg | CHROMOSOME_II:g.7591994G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | R07G3 | |
| Flanking_sequences | accgcctcacgcagtcgcatgaatgccagt | aaccgcctcccggtgagtctttgaattttt | |||
| Mapping_target | R07G3 | ||||
| Type_of_mutation | Substitution | g | h | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00005369 | ||||
| Laboratory | CZ | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006363 | |||
| Transcript | F35D2.5a.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | F35D2.5a.1:c.211C>T | ||||
| HGVSp | CE33391:p.Glu71Ter | ||||
| cDNA_position | 215 | ||||
| CDS_position | 211 | ||||
| Protein_position | 71 | ||||
| Exon_number | 4/19 | ||||
| Codon_change | Gaa/Taa | ||||
| Amino_acid_change | E/* | ||||
| Interactor | WBInteraction000502715 | ||||
| WBInteraction000502837 | |||||
| WBInteraction000504813 | |||||
| WBInteraction000523867 | |||||
| WBInteraction000523870 | |||||
| WBInteraction000541722 | |||||
| Genetics | Interpolated_map_position | II | 0.504835 | ||
| Description (2) | |||||
| Reference | WBPaper00028886 | ||||
| WBPaper00032993 | |||||
| WBPaper00005543 | |||||
| WBPaper00045690 | |||||
| WBPaper00045955 | |||||
| Method | Substitution_allele |
