WormBase Tree Display for Variation: WBVar00065718
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WBVar00065718 | Name | Public_name | WBVar00065718 | ||
---|---|---|---|---|---|
Other_name | pas4551 | ||||
haw44265 | |||||
haw144097 | |||||
cewivar00107521 | |||||
R13A5.7.1:c.*323A>C | |||||
R13A5.3.2:c.*85T>G | |||||
HGVSg | CHROMOSOME_III:g.7567513T>G | ||||
Sequence_details | SMap | S_parent | Sequence | R13A5 | |
Flanking_sequences | aatttattattttcatctgaatttt | taataacctgttttggagcaattgg | |||
Mapping_target | R13A5 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (26) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01265595 | |||
WBVar00563962 | |||||
WBVar01330922 | |||||
WBVar00099692 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020050 | |||
WBGene00020047 | |||||
Transcript | R13A5.7.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R13A5.7.1:c.*323A>C | ||||
cDNA_position | 1524 | ||||
Exon_number | 10/10 | ||||
R13A5.3.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R13A5.3.2:c.*85T>G | ||||
cDNA_position | 511 | ||||
Exon_number | 6/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw44265 | ||||
Method | WGS_Hawaiian_Waterston |