WormBase Tree Display for Variation: WBVar00061222
expand all nodes | collapse all nodes | view schema
WBVar00061222 | Name | Public_name | WBVar00061222 | ||
---|---|---|---|---|---|
Other_name | haw43366 | ||||
cewivar00196756 | |||||
F54E7.3m.1:c.2925+212T>C | |||||
F54E7.3f.1:c.3063+212T>C | |||||
F54E7.3e.1:c.3063+212T>C | |||||
F54E7.3l.1:c.2916+212T>C | |||||
F54E7.3g.1:c.3072+212T>C | |||||
F54E7.3c.2:c.3192+212T>C | |||||
F54E7.3b.3:c.3309+212T>C | |||||
F54E7.3i.1:c.3309+212T>C | |||||
F54E7.3k.1:c.3162+212T>C | |||||
F54E7.3h.1:c.3300+212T>C | |||||
F54E7.3j.1:c.3153+212T>C | |||||
F54E7.3a.1:c.3300+212T>C | |||||
F54E7.3d.1:c.3072+212T>C | |||||
F54E7.3b.1:c.3309+212T>C | |||||
F54E7.3c.1:c.3192+212T>C | |||||
F54E7.3b.2:c.3309+212T>C | |||||
HGVSg | CHROMOSOME_III:g.5673592T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F54E7 | |
Flanking_sequences | tatctgaaattttcttatcgaattt | aatattttacgagcaatccgggcat | |||
Mapping_target | F54E7 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003918 | |||
Transcript | F54E7.3b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3b.3:c.3309+212T>C | ||||
Intron_number | 11/14 | ||||
F54E7.3i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3i.1:c.3309+212T>C | ||||
Intron_number | 12/17 | ||||
F54E7.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3b.1:c.3309+212T>C | ||||
Intron_number | 12/15 | ||||
F54E7.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3g.1:c.3072+212T>C | ||||
Intron_number | 7/8 | ||||
F54E7.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3h.1:c.3300+212T>C | ||||
Intron_number | 12/17 | ||||
F54E7.3k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3k.1:c.3162+212T>C | ||||
Intron_number | 9/10 | ||||
F54E7.3m.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3m.1:c.2925+212T>C | ||||
Intron_number | 6/7 | ||||
F54E7.3l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3l.1:c.2916+212T>C | ||||
Intron_number | 6/9 | ||||
F54E7.3j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3j.1:c.3153+212T>C | ||||
Intron_number | 11/14 | ||||
F54E7.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3e.1:c.3063+212T>C | ||||
Intron_number | 7/12 | ||||
F54E7.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3d.1:c.3072+212T>C | ||||
Intron_number | 7/12 | ||||
F54E7.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3a.1:c.3300+212T>C | ||||
Intron_number | 12/15 | ||||
F54E7.3b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3b.2:c.3309+212T>C | ||||
Intron_number | 12/14 | ||||
F54E7.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3c.1:c.3192+212T>C | ||||
Intron_number | 7/9 | ||||
F54E7.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3f.1:c.3063+212T>C | ||||
Intron_number | 7/10 | ||||
F54E7.3c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54E7.3c.2:c.3192+212T>C | ||||
Intron_number | 7/10 | ||||
Remark | [20081124 db] this Variation was previously named hw43366 | ||||
Method | WGS_Hawaiian_Waterston |