WormBase Tree Display for Variation: WBVar00000305
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WBVar00000305 | Evidence | Paper_evidence | WBPaper00005823 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | ax72 | |||||
Other_name | CE23241:p.Ala580Thr | ||||||
Y110A7A.17a.1:c.1738G>A | |||||||
CE53900:p.Ala582Thr | |||||||
Y110A7A.17b.1:c.1744G>A | |||||||
HGVSg | CHROMOSOME_I:g.5124919C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y110A7A | |||
Flanking_sequences | tgcttctcattacaaagacagcatactcag | caattgaatgtatggagagggctattcaac | |||||
Mapping_target | Y110A7A | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00005823 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | JH | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003132 | |||||
Transcript | Y110A7A.17b.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 0.991 | probably_damaging | |||||
HGVSc | Y110A7A.17b.1:c.1744G>A | ||||||
HGVSp | CE53900:p.Ala582Thr | ||||||
cDNA_position | 1758 | ||||||
CDS_position | 1744 | ||||||
Protein_position | 582 | ||||||
Exon_number | 10/13 | ||||||
Codon_change | Gca/Aca | ||||||
Amino_acid_change | A/T | ||||||
Y110A7A.17a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 0.991 | probably_damaging | |||||
HGVSc | Y110A7A.17a.1:c.1738G>A | ||||||
HGVSp | CE23241:p.Ala580Thr | ||||||
cDNA_position | 1750 | ||||||
CDS_position | 1738 | ||||||
Protein_position | 580 | ||||||
Exon_number | 10/13 | ||||||
Codon_change | Gca/Aca | ||||||
Amino_acid_change | A/T | ||||||
Genetics | Interpolated_map_position | I | -0.397736 | ||||
Reference | WBPaper00005823 | ||||||
Method | Substitution_allele |