WormBase Tree Display for Variation: WBVar01435004

WBVar01435004 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01435004
    Other_name (20)
    HGVSg: CHROMOSOME_I:g.14622795T>C
  Sequence_details: SMap: S_parent: Sequence: Y105E8B
    Flanking_sequences: ATATAGACTTACACAAATTGACAATGACAT TAGATATCACATATAAAGCCCCTTAGACCT
    Mapping_target: Y105E8B
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193323066
        dbSNP_ss ss 295498984
    Status: Live
  Affects: Gene: WBGene00002978
    Transcript: Y105E8B.1l.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1l.1:c.688+33A>G
        Intron_number: 7/8
      Y105E8B.1k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1k.1:c.688+33A>G
        Intron_number: 6/7
      Y105E8B.1s.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1s.1:c.772+33A>G
        Intron_number: 8/8
      Y105E8B.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1b.1:c.499+33A>G
        Intron_number: 6/8
      Y105E8B.1n.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1n.1:c.385+33A>G
        Intron_number: 4/4
      Y105E8B.1o.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1o.1:c.772+33A>G
        Intron_number: 9/10
      Y105E8B.1q.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1q.1:c.772+33A>G
        Intron_number: 8/8
      Y105E8B.1p.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1p.1:c.772+33A>G
        Intron_number: 8/8
      Y105E8B.1m.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1m.1:c.499+33A>G
        Intron_number: 5/5
      Y105E8B.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1e.1:c.688+33A>G
        Intron_number: 7/9
      Y105E8B.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1a.1:c.772+33A>G
        Intron_number: 9/10
      Y105E8B.1e.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1e.2:c.688+33A>G
        Intron_number: 7/8
      Y105E8B.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1i.1:c.499+33A>G
        Intron_number: 5/5
      Y105E8B.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1c.1:c.688+33A>G
        Intron_number: 7/9
      Y105E8B.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1d.1:c.772+33A>G
        Intron_number: 9/11
      Y105E8B.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1g.1:c.772+33A>G
        Intron_number: 9/9
      Y105E8B.1t.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1t.1:c.688+33A>G
        Intron_number: 7/9
      Y105E8B.1r.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1r.1:c.772+33A>G
        Intron_number: 8/8
      Y105E8B.1j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1j.1:c.385+33A>G
        Intron_number: 4/4
      Y105E8B.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8B.1f.1:c.*159+33A>G
        Intron_number: 10/10
  Reference: WBPaper00040707
  Method: WGS_Andersen