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WormBase Tree Display for Transcript: Y57G11C.11b

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Name Class

Y57G11C.11bSMapS_parentSequenceY57G11C
StructureSource_exons1161
214411
DB_infoDB_remarknon-protein coding RNA coq-3
DatabaseRNAcentralURSidURS000076C18D
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
VisibleGeneWBGene00000763
Corresponding_PCR_product[pmid12709403]:coq-3
cenix:170-c9
mv_Y57G11C.11
Corresponding_oligo_set (23)
RNAi_resultWBRNAi00022972
WBRNAi00057682
WBRNAi00037592
Microarray_results (26)
Brief_identificationnon-coding Transcript Isoform
Last_reviewed20 May 2014 00:00:00WBPerson4025
Remark[140520 gw3] Converted this from a CDS to this non-coding transcript isoform based on the RNASeq splice data and the SL1/SL2 site.Curator_confirmedWBPerson4025
Feature_evidenceWBsf000574
WBsf184278
From_analysisRNASeq_Hillier_elegans
[060712 gw3] This isoform appears to be rather short, but the SL1 site has a lot of evidence supporting it and so we must assume that the first START codno after it is the start of this CDS.Curator_confirmedWBPerson4025
Feature_evidenceWBsf000574
PropertiesTranscriptncRNA
IsoformCurator_confirmedWBPerson4025
Feature_evidenceWBsf000574
WBsf184278
Methodnon_coding_transcript