WormBase Tree Display for Transcript: Y57G11C.11b
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Y57G11C.11b | SMap | S_parent | Sequence | Y57G11C | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 161 | ||
214 | 411 | ||||
DB_info | DB_remark | non-protein coding RNA coq-3 | |||
Database | RNAcentral | URSid | URS000076C18D | ||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Visible | Gene | WBGene00000763 | |||
Corresponding_PCR_product | [pmid12709403]:coq-3 | ||||
cenix:170-c9 | |||||
mv_Y57G11C.11 | |||||
Corresponding_oligo_set (23) | |||||
RNAi_result | WBRNAi00022972 | ||||
WBRNAi00057682 | |||||
WBRNAi00037592 | |||||
Microarray_results (26) | |||||
Brief_identification | non-coding Transcript Isoform | ||||
Last_reviewed | 20 May 2014 00:00:00 | WBPerson4025 | |||
Remark | [140520 gw3] Converted this from a CDS to this non-coding transcript isoform based on the RNASeq splice data and the SL1/SL2 site. | Curator_confirmed | WBPerson4025 | ||
Feature_evidence | WBsf000574 | ||||
WBsf184278 | |||||
From_analysis | RNASeq_Hillier_elegans | ||||
[060712 gw3] This isoform appears to be rather short, but the SL1 site has a lot of evidence supporting it and so we must assume that the first START codno after it is the start of this CDS. | Curator_confirmed | WBPerson4025 | |||
Feature_evidence | WBsf000574 | ||||
Properties | Transcript | ncRNA | |||
Isoform | Curator_confirmed | WBPerson4025 | |||
Feature_evidence | WBsf000574 | ||||
WBsf184278 | |||||
Method | non_coding_transcript |