WormBase Tree Display for Strain: WBStrain00040228
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| WBStrain00040228 | Status | Live | ||
|---|---|---|---|---|
| Genotype | nDf51 V; mir-84(n4037) X; ctIs39. | |||
| Public_name | VT1142 | |||
| Contains | Gene | WBGene00003312 | ||
| WBGene00003335 | ||||
| Variation | WBVar00090778 | |||
| WBVar00323159 | ||||
| Rearrangement | nDf51 | |||
| Transgene | WBTransgene00000374 | |||
| Properties | CGC_received | 31 May 2006 00:00:00 | ||
| Location | CGC | |||
| Made_by | WBPerson3211 | |||
| Remark | ctIs39 [hbl-1::GFP + rol-6(su1006)]. Rollers and GFP+. Retarded heterochronic phenotype, reiteration of L2-stage program resulting in extra seam cells by the L3 stage and incomplete alae formation. >75% of animals explode at the vulva at the L4 molt. ctIs39 [hbl-1::GFP]: integrated reporter codes for 133 amino acids of HBL-1 followed by GFP, and contains 1.4 kb of hbl-1 3' UTR plus an NLS. hbl-1::GFP is elevated in the hypodermal syncytium at the L3 stage. nDf51 deletion deletes 5930 bp of cosmid F56A12 from 3520 to 9451, starting 1762 bp upstream of mir-241, covering mir-241 and lin-58. lin-58 is at 5908-5885 and mir-241 is at 7681-7661. nDf51: 5' of deletion: TGAAAGAAGCAGTTGAAAGCTTGCAGCCGACGAAAACTAGTGTAGCG. 3' of deletion: CTCACAATATTTTCATTTGAATATCGCGTTGAATTTGTAAGTGT. n4037 deletion is between 2891 and 3682 of clone B0395. mir-84 is at 3351-3330 in B0395. | Inferred_automatically | From CGC strain data | |
| ctIs39 [hbl-1::GFP + rol-6(su1006)]. Rollers and GFP+. Retarded heterochronic phenotype, reiteration of L2-stage program resulting in extra seam cells by the L3 stage and incomplete alae formation. >75% of animals explode at the vulva at the L4 molt. ctIs39 [hbl-1::GFP]: integrated reporter codes for 133 amino acids of HBL-1 followed by GFP, and contains 1.4 kb of hbl-1 3' UTR plus an NLS. hbl-1::GFP is elevated in the hypodermal syncytium at the L3 stage. nDf51 is a 5930 bp deletion starting 1762 bp upstream of mir-241, removing mir-241, mir-48, and F56A12.6 (snoRNA). | Inferred_automatically | From CGC strain data | ||
| Species | Caenorhabditis elegans |
